RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 ATP6AP2A0A1C7CYW4 349 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 A0A1W2PPB8 328 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 A0A1W2PRS3 328 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 TMEM120BA0PK00 339 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 KIR3DP1A8MWS1 328 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 CDK2AP1O14519 115 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 LSM1O15116 133 aaKnown RBP12.92□□□□□ -0.34
DDX41-212ENST00000511040 AKAP10O43572 662 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 PEX1O43933 1283 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 NME6O75414 186 aaPredicted RBP12.92□□□□□ -0.34
DDX41-212ENST00000511040 ATP6AP2O75787 350 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 LRATO95237 230 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 NADKO95544 446 aaPredicted RBP12.92□□□□□ -0.34
DDX41-212ENST00000511040 ATP1B1P05026 303 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 EDN3P14138 238 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 DDCP20711 480 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 S1PR1P21453 382 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 PRPH2P23942 346 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 SERPINB5P36952 375 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 MEOX1P50221 254 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 NR0B1P51843 470 aaKnown RBP12.92□□□□□ -0.34
DDX41-212ENST00000511040 TDGF1P3P51864 188 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 ABCE1P61221 599 aaKnown RBP12.92□□□□□ -0.34
DDX41-212ENST00000511040 MRPS35P82673 323 aaKnown RBP12.92□□□□□ -0.34
DDX41-212ENST00000511040 DUSP8Q13202 625 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 EBPQ15125 230 aaKnown RBP12.92□□□□□ -0.34
DDX41-212ENST00000511040 MPEG1Q2M385 716 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 RFTN2Q52LD8 501 aaPredicted RBP12.92□□□□□ -0.34
DDX41-212ENST00000511040 RNFT1Q5M7Z0 435 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 HHATQ5VTY9 493 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 ANKRD26P1Q6NSI1 321 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 GPALPP1Q8IXQ4 340 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 FAM98AQ8NCA5 519 aaKnown RBP12.92□□□□□ -0.34
DDX41-212ENST00000511040 DNAJB8Q8NHS0 232 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 FAM76AQ8TAV0 307 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 SLC22A8Q8TCC7 542 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 KAT2AQ92830 837 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 C3orf30Q96M34 536 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 FRMD6Q96NE9 622 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 MIEF1Q9NQG6 463 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 SLC35C2Q9NQQ7 365 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 DEPPQ9NTK1 212 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 GIMAP4Q9NUV9 329 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 BAIAP2L1Q9UHR4 511 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 ENTPD4Q9Y227 616 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 KLF13Q9Y2Y9 288 aaPredicted RBP12.92□□□□□ -0.34
DDX41-212ENST00000511040 UBR5O95071 2799 aaPredicted RBP12.91□□□□□ -0.34
DDX41-212ENST00000511040 ASPDHA6ND91 283 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 OR6C76A6NM76 312 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 TMEM114B3SHH9 223 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 NPIPA5E9PKD4 350 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 PEX11AO75192 247 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 SEMA7AO75326 666 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 UNC5CO95185 931 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 CBX7O95931 251 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 SDC1P18827 310 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 SOX18P35713 384 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 GSTM5P46439 218 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 WDR4P57081 412 aaKnown RBP12.91□□□□□ -0.34
DDX41-212ENST00000511040 ALDH6A1Q02252 535 aaKnown RBP12.91□□□□□ -0.34
DDX41-212ENST00000511040 MAP4K2Q12851 820 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 NNATQ16517 81 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 TRMT12Q53H54 448 aaKnown RBP12.91□□□□□ -0.34
DDX41-212ENST00000511040 FHL5Q5TD97 284 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 HLA-DQA1Q5Y7H0 255 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 OPN5Q6U736 354 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 LYPD8Q6UX82 237 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 GFRALQ6UXV0 394 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 RTL4Q6ZR62 310 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 RNF165Q6ZSG1 346 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 ZNF781Q8N8C0 355 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 PSD4Q8NDX1 1056 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 OR7G1Q8NGA0 311 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 OR52R1Q8NGF1 315 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 OR5M3Q8NGP4 307 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 C16orf52Q8NHV5 167 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.91□□□□□ -0.34
DDX41-212ENST00000511040 ARL8AQ96BM9 186 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 TLCD1Q96CP7 247 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 PPP1R36Q96LQ0 422 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 TSSK3Q96PN8 268 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 BBS4Q96RK4 519 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 C20orf27Q9GZN8 174 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 EHD3Q9NZN3 535 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 SEC14L3Q9UDX4 400 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 NPIPA1Q9UND3 350 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 OSGIN2Q9Y236 505 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 DTX4Q9Y2E6 619 aa12.91□□□□□ -0.34
DDX41-212ENST00000511040 PINLYPA6NC86 204 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 NPIPB8E9PQR5 432 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 ZNHIT1O43257 154 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 AGFG2O95081 481 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 JUNP05412 331 aaKnown RBP12.9□□□□□ -0.34
DDX41-212ENST00000511040 CCL3P10147 92 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 SLC1A6P48664 564 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 STX3Q13277 289 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 UBAP2LQ14157 1087 aaKnown RBP12.9□□□□□ -0.34
DDX41-212ENST00000511040 PDCD2Q16342 344 aaPredicted RBP12.9□□□□□ -0.34
DDX41-212ENST00000511040 ZNF791Q3KP31 576 aaPredicted RBP12.9□□□□□ -0.34
DDX41-212ENST00000511040 ZNF628Q5EBL2 1059 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms