RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 XKRXQ6PP77 449 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 PAOXQ6QHF9 649 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 TAGAPQ8N103 731 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 RPRMLQ8N4K4 120 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 CCDC63Q8NA47 563 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 SIMC1Q8NDZ2 872 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 CDC26Q8NHZ8 85 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 SDCCAG3Q96C92 435 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 APIPQ96GX9 242 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 DMRTA2Q96SC8 542 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 SHCBP1LQ9BZQ2 653 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 EXO5Q9H790 373 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 IL1RL2Q9HB29 575 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 BCAP29Q9UHQ4 241 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 CES1P1Q9UKY3 287 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 DTX4Q9Y2E6 619 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 KLF2Q9Y5W3 355 aaPredicted RBP13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 NOTCH2Q04721 2471 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 E9PLN8 166 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 C19orf84I3L1E1 186 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 UBFD1O14562 309 aaKnown RBP13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 HNRNPRO43390 633 aaKnown RBP13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 PROCP04070 461 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 IL3P08700 152 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 RFPL3SP0C7P2 107 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 PRF1P14222 555 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 SERPINB3P29508 390 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 RAE1P78406 368 aaKnown RBP13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 FUT7Q11130 342 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 FOXO1Q12778 655 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 SPDYAQ5MJ70 313 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 BICRALQ6AI39 1079 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 ZYG11AQ6WRX3 759 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 SLC34A3Q8N130 599 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 C4orf33Q8N1A6 199 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 VWA5B2Q8N398 1253 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 FBXW8Q8N3Y1 598 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 FAM109AQ8N4B1 249 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 MARVELD2Q8N4S9 558 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 SLC15A4Q8N697 577 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 ZNF615Q8N8J6 731 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 OR2W6PQ8NHA6 318 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 PAQR8Q8TEZ7 354 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 CHTF18Q8WVB6 975 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 DIO2Q92813 273 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 SMC6Q96SB8 1091 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 VKORC1Q9BQB6 163 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 FAIM2Q9BWQ8 316 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 LDAHQ9H6V9 325 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 ZDHHC11Q9H8X9 412 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 L2HGDHQ9H9P8 463 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 SH2D2AQ9NP31 389 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 PNPLA3Q9NST1 481 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 HEY2Q9UBP5 337 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 STK38LQ9Y2H1 464 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 CHCHD2Q9Y6H1 151 aaPredicted RBP13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 FREM3P0C091 2139 aa13.63□□□□□ -0.23
UBE2D3-228ENST00000508974 LRBAP50851 2863 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 TLDC2A0PJX2 215 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 COPEO14579 308 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 CLDN14O95500 239 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 ENO1P06733 434 aaKnown RBP13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 HSD3B1P14060 373 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 CSNK2A2P19784 350 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 GPX3P22352 226 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 HSD3B2P26439 372 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 NAGLUP54802 743 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 PKNOX1P55347 436 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 MRPS35P82673 323 aaKnown RBP13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 ACSM2AQ08AH3 577 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 ZNF630Q2M218 657 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 PRICKLE4Q2TBC4 344 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 EMC4Q5J8M3 183 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 ACSM2BQ68CK6 577 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 ZNF585AQ6P3V2 769 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 RGS9BPQ6ZS82 235 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 MCEMP1Q8IX19 187 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 SRRM1Q8IYB3 904 aaKnown RBP13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 EID3Q8N140 333 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 ZNF441Q8N8Z8 693 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 EXOSC8Q96B26 276 aaKnown RBP13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 CNRIP1Q96F85 164 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 DOHHQ9BU89 302 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 ITPAQ9BY32 194 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 TP63Q9H3D4 680 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 ANKZF1Q9H8Y5 726 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 ANKRA2Q9H9E1 313 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 PROK2Q9HC23 129 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 MAT2BQ9NZL9 334 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 MCM8Q9UJA3 840 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 UTS2RQ9UKP6 389 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 BOKQ9UMX3 212 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 DLGAP4Q9Y2H0 992 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 NPFFR2Q9Y5X5 522 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 ZNF780BQ9Y6R6 833 aa13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 PHF3Q92576 2039 aaKnown RBP13.62□□□□□ -0.23
UBE2D3-228ENST00000508974 LRRC3CA6NJW4 275 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 PLIN3O60664 434 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 NME6O75414 186 aaPredicted RBP13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 CRCPO75575 148 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms