RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 SLC35F6Q8N357 371 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 TCAIMQ8N3R3 496 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 ZNF473Q8WTR7 871 aaKnown RBP8.54□□□□□ -1.04
NEDD9-211ENST00000508546 UCN3Q969E3 161 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 MAGOHBQ96A72 148 aaKnown RBP8.54□□□□□ -1.04
NEDD9-211ENST00000508546 PIK3IP1Q96FE7 263 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 MARK4Q96L34 752 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 TMEM79Q9BSE2 394 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 PHACTR1Q9C0D0 580 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 CNOT10Q9H9A5 744 aaKnown RBP8.54□□□□□ -1.04
NEDD9-211ENST00000508546 TEX10Q9NXF1 929 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-211ENST00000508546 WWOXQ9NZC7 414 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 SLC17A6Q9P2U8 582 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 CLCF1Q9UBD9 225 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 CTNNAL1Q9UBT7 734 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 PHF11Q9UIL8 331 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 YLPM1P49750 1951 aaKnown RBP8.53□□□□□ -1.04
NEDD9-211ENST00000508546 PCNX3Q9H6A9 2034 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 C2orf92A0A1B0GVN3 265 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 H0Y3Z8 333 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 TAPBPO15533 448 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 TMCC2O75069 709 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 SOX30O94993 753 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 GPR75O95800 540 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 IFNA2P01563 188 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 CRHP06850 196 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 RHOXF2BP0C7M4 288 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 NID1P14543 1247 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 LOXP28300 417 aaPredicted RBP8.53□□□□□ -1.04
NEDD9-211ENST00000508546 SERPINB1P30740 379 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 TLX1P31314 330 aaPredicted RBP8.53□□□□□ -1.04
NEDD9-211ENST00000508546 SSR2P43308 183 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 NRG3P56975 720 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 PCDH1Q08174 1060 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 FAM27E3Q08E93 113 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 SLAMF1Q13291 335 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 CAPRIN1Q14444 709 aaKnown RBP8.53□□□□□ -1.04
NEDD9-211ENST00000508546 CYP1B1Q16678 543 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 HIST2H2ACQ16777 129 aaPredicted RBP8.53□□□□□ -1.04
NEDD9-211ENST00000508546 DEPDC1Q5TB30 811 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 HIST2H2AA3Q6FI13 130 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 OR4C11Q6IEV9 310 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 HEPHL1Q6MZM0 1159 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 TMEM64Q6YI46 380 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 PLEKHM3Q6ZWE6 761 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 YRDCQ86U90 279 aaKnown RBP8.53□□□□□ -1.04
NEDD9-211ENST00000508546 GPR180Q86V85 440 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 GCNT2Q8N0V5 402 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 MEIOBQ8N635 442 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 C17orf47Q8NEP4 570 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 TRIM58Q8NG06 486 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 OR1J4Q8NGS1 313 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 RIT1Q92963 219 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 ADIPOR1Q96A54 375 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 CTHRC1Q96CG8 243 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 KRT12Q99456 494 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 NAPGQ99747 312 aaPredicted RBP8.53□□□□□ -1.04
NEDD9-211ENST00000508546 MED18Q9BUE0 208 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 G6PC3Q9BUM1 346 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 PLAC1Q9HBJ0 212 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 PPANQ9NQ55 473 aaKnown RBP8.53□□□□□ -1.04
NEDD9-211ENST00000508546 ZNF701Q9NV72 531 aaPredicted RBP8.53□□□□□ -1.04
NEDD9-211ENST00000508546 KLHL28Q9NXS3 571 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 ADGRE2Q9UHX3 823 aa8.53□□□□□ -1.04
NEDD9-211ENST00000508546 MGAM2Q2M2H8 2515 aa8.52□□□□□ -1.04
NEDD9-211ENST00000508546 A0A1W2PNV4 684 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 NCF1BA6NI72 391 aaPredicted RBP8.52□□□□□ -1.05
NEDD9-211ENST00000508546 NCF1CA8MVU1 366 aaPredicted RBP8.52□□□□□ -1.05
NEDD9-211ENST00000508546 GNB5O14775 395 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 SNPHO15079 494 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 HCRTR2O43614 444 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 OR10H2O60403 315 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 BANF1O75531 89 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 STK16O75716 305 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 TGFB1P01137 390 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 NCF1P14598 390 aaPredicted RBP8.52□□□□□ -1.05
NEDD9-211ENST00000508546 NAGAP17050 411 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 EPORP19235 508 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 CXCR5P32302 372 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 CPOXP36551 454 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 CD79BP40259 229 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 BUD31P41223 144 aaPredicted RBP8.52□□□□□ -1.05
NEDD9-211ENST00000508546 HSPA7P48741 367 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 ARFIP1P53367 373 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 HNRNPH2P55795 449 aaKnown RBP8.52□□□□□ -1.05
NEDD9-211ENST00000508546 TAS2R39P59534 338 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 IRF8Q02556 426 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 DMTNQ08495 405 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 FUT7Q11130 342 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 CHIT1Q13231 466 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 ZNF460Q14592 562 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 SETDB1Q15047 1291 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 PDK4Q16654 411 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 MSS51Q4VC12 460 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 KHDRBS2Q5VWX1 349 aaKnown RBP8.52□□□□□ -1.05
NEDD9-211ENST00000508546 HLA-DQA1Q5Y7H0 255 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 C18orf63Q68DL7 685 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 SULT1C3Q6IMI6 304 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 SLC30A6Q6NXT4 461 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 TRMT10BQ6PF06 316 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms