RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 LIPT1Q9Y234 373 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 GINS2Q9Y248 185 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 EVPLQ92817 2033 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 SIPA1L1O43166 1804 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 BDP1A6H8Y1 2624 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 FRMPD2Q68DX3 1309 aaPredicted RBP4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 A0A087WZ62 844 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 KIR2DS5A0A0G2JLQ3 304 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 A0A1B0GVI7 797 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 hCG_1642624A0A1W2PR95 340 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 ARGFXA6NJG6 315 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 A6NL46 340 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 VSTM5A8MXK1 200 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 E9PAM4 449 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 H0YCG3 227 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 KIR2DS3K7RE56 304 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 SLC1A7O00341 560 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 UBDO15205 165 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 SEC14L5O43304 696 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 AIREO43918 545 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 HS6ST1O60243 411 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 RAD1O60671 282 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 HUS1O60921 280 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 PIAS1O75925 651 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 SLITRK3O94933 977 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 PROS1P07225 676 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 RBP1P09455 135 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 GNAO1P09471 354 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 PRKAR1AP10644 381 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 CKMT1AP12532 417 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 SLC2A4P14672 509 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 NELFEP18615 380 aaKnown RBP4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 PGAM1P18669 254 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 RAB4AP20338 218 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 FGFR2P21802 821 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 CHMP24386 653 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 CDH5P33151 784 aaPredicted RBP4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 CDKN2BP42772 138 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 ASMTP46597 345 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 QARSP47897 775 aaKnown RBP4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 VEGFCP49767 419 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 MEOX2P50222 304 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 GPR143P51810 404 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 ARHGDIBP52566 201 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 ATXN3P54252 364 aaPredicted RBP4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 MLLT10P55197 1068 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 PSMC5P62195 406 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 CHRNB3Q05901 458 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 MGAT3Q09327 533 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 ABRQ12979 859 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 CSTF3Q12996 717 aaKnown RBP4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 SEMA5AQ13591 1074 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 FASTKQ14296 549 aaKnown RBP4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 PGM5Q15124 567 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 PON2Q15165 354 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 TOMM20Q15388 145 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 AANATQ16613 207 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 TAZQ16635 292 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 DUSP6Q16828 381 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 MICAQ29983 383 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 ADPRMQ3LIE5 342 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 FUT11Q495W5 492 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 TMEM196Q5HYL7 178 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 FAM209BQ5JX69 171 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 DGKKQ5KSL6 1271 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 FAM90A2PQ658T7 463 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 STEAP4Q687X5 459 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 REP15Q6BDI9 236 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 OR7E24Q6IFN5 339 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 XRRA1Q6P2D8 792 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 GJB7Q6PEY0 223 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 METAP1DQ6UB28 335 aaPredicted RBP4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 TEX261Q6UWH6 196 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 TFAP2EQ6VUC0 442 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 CDHR3Q6ZTQ4 885 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 BTN2A1Q7KYR7 527 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 MON1BQ7L1V2 547 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 CCDC190Q86UF4 302 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 COMMD7Q86VX2 200 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 HIPK1Q86Z02 1210 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 PHC2Q8IXK0 858 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 CCDC36Q8IYA8 594 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 SYTL1Q8IYJ3 562 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 ZNF444Q8N0Y2 327 aaPredicted RBP4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 EID3Q8N140 333 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 FBXL14Q8N1E6 418 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 GHDCQ8N2G8 530 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 TBC1D19Q8N5T2 526 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 MYCT1Q8N699 235 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 LRRC17Q8N6Y2 441 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 SRFBP1Q8NEF9 429 aaKnown RBP4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 OR6S1Q8NH40 331 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 ACTL9Q8TC94 416 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 CANT1Q8WVQ1 401 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 ST8SIA4Q92187 359 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 AP3S1Q92572 193 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 SLCO4A1Q96BD0 722 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 PTERQ96BW5 349 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 SLC47A1Q96FL8 570 aa4.32□□□□□ -1.72
PDLIM5-211ENST00000508531 LRRC46Q96FV0 321 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms