RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 FRAT1Q92837 279 aaPredicted RBP3.03□□□□□ -1.92
UBE2D3-225ENST00000508476 CXorf58Q96LI9 332 aa3.03□□□□□ -1.92
UBE2D3-225ENST00000508476 CCDC114Q96M63 670 aa3.03□□□□□ -1.92
UBE2D3-225ENST00000508476 PANX3Q96QZ0 392 aa3.03□□□□□ -1.92
UBE2D3-225ENST00000508476 CITED2Q99967 270 aaPredicted RBP3.03□□□□□ -1.92
UBE2D3-225ENST00000508476 ANP32EQ9BTT0 268 aa3.03□□□□□ -1.92
UBE2D3-225ENST00000508476 NTMT1Q9BV86 223 aa3.03□□□□□ -1.92
UBE2D3-225ENST00000508476 TMEM206Q9H813 350 aa3.03□□□□□ -1.92
UBE2D3-225ENST00000508476 TMEM9Q9P0T7 183 aa3.03□□□□□ -1.92
UBE2D3-225ENST00000508476 SENP1Q9P0U3 644 aa3.03□□□□□ -1.92
UBE2D3-225ENST00000508476 CDH7Q9ULB5 785 aa3.03□□□□□ -1.92
UBE2D3-225ENST00000508476 ERVK-19Q9WJR5 959 aa3.03□□□□□ -1.92
UBE2D3-225ENST00000508476 NTNG1Q9Y2I2 539 aa3.03□□□□□ -1.92
UBE2D3-225ENST00000508476 STAM2O75886 525 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 OAS1P00973 400 aaKnown RBP3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 PROS1P07225 676 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 HOXC4P09017 264 aaPredicted RBP3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 MMP10P09238 476 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 TPBGLP0DKB5 382 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 CPN1P15169 458 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 ZNF32P17041 273 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 ZNF133P52736 654 aaPredicted RBP3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 NHSL2Q5HYW2 709 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 CCDC158Q5M9N0 1113 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 STEAP1BQ6NZ63 245 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 ADAMTSL5Q6ZMM2 481 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 MOB2Q70IA6 237 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 TUSC5Q8IXB3 177 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 NUP93Q8N1F7 819 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 ATAD1Q8NBU5 361 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 OR2L5Q8NG80 312 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 OR7G3Q8NG95 312 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 OR13F1Q8NGS4 319 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 OR4L1Q8NH43 312 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 FAM46BQ96A09 425 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 AP2M1Q96CW1 435 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 ZNF799Q96GE5 643 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 GUCD1Q96NT3 240 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 OR5M11Q96RB7 305 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 MLPHQ9BV36 600 aaPredicted RBP3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 DNAJC11Q9NVH1 559 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 RAI14Q9P0K7 980 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 EIF4G3O43432 1585 aaKnown RBP3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 FGD5Q6ZNL6 1462 aa3.02□□□□□ -1.93
UBE2D3-225ENST00000508476 MED1Q15648 1581 aaPredicted RBP3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 DIP2BQ9P265 1576 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 FAM231BA6NCW3 169 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 TTI1O43156 1089 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 TSPAN2O60636 221 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 TOM1O60784 492 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 TBCAO75347 108 aaKnown RBP3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 VDRP11473 427 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 HSPA14Q0VDF9 509 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 GIT2Q14161 759 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 MS4A13Q5J8X5 152 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 RHBDD2Q6NTF9 364 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 TATDN1Q6P1N9 297 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 HOOK3Q86VS8 718 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 VSIG1Q86XK7 387 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 APOBEC3FQ8IUX4 373 aaKnown RBP3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 UNC5CLQ8IV45 518 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 CCDC83Q8IWF9 413 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 SNRNP27Q8WVK2 155 aaKnown RBP3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 TECTBQ96PL2 329 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 MIEF1Q9NQG6 463 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 KLHL21Q9UJP4 597 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 MRTO4Q9UKD2 239 aaKnown RBP3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 EXOC7Q9UPT5 735 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 CFTRP13569 1480 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 SNAPC4Q5SXM2 1469 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 YEATS2Q9ULM3 1422 aa3.01□□□□□ -1.93
UBE2D3-225ENST00000508476 MAPKBP1O60336 1514 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 TMEM129A0AVI4 362 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 BICDL2A1A5D9 508 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 TXNDC12O95881 172 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 SNRPCP09234 159 aaKnown RBP3□□□□□ -1.93
UBE2D3-225ENST00000508476 CT45A8P0DMV1 189 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 CT45A9P0DMV2 189 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 SCG2P13521 617 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 PVRP15151 417 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 SERPINB6P35237 376 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 DEKP35659 375 aaKnown RBP3□□□□□ -1.93
UBE2D3-225ENST00000508476 ARHGDIBP52566 201 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 SLC7A2P52569 658 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 UCNP55089 124 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 CT45A2Q5DJT8 189 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 IGFL3Q6UXB1 125 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 GBP6Q6ZN66 633 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 SIAH3Q8IW03 269 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 UBTD2Q8WUN7 234 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 MRPL53Q96EL3 112 aaKnown RBP3□□□□□ -1.93
UBE2D3-225ENST00000508476 EPSTI1Q96J88 318 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 COG3Q96JB2 828 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 TSPAN18Q96SJ8 248 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 HES7Q9BYE0 225 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 RSPH9Q9H1X1 276 aaPredicted RBP3□□□□□ -1.93
UBE2D3-225ENST00000508476 ZCCHC17Q9NP64 241 aaKnown RBP3□□□□□ -1.93
UBE2D3-225ENST00000508476 MTF2Q9Y483 593 aaPredicted RBP3□□□□□ -1.93
UBE2D3-225ENST00000508476 PTPRTO14522 1441 aa3□□□□□ -1.93
UBE2D3-225ENST00000508476 ABCC8Q09428 1581 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms