RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 NSUN5Q96P11 429 aaKnown RBP10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 FRG2BQ96QU4 278 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 LRRC1Q9BTT6 524 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 MRPL1Q9BYD6 325 aaKnown RBP10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 OR10A5Q9H207 317 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 ZBTB26Q9HCK0 441 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 DNAJB12Q9NXW2 375 aaKnown RBP10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 XPR1Q9UBH6 696 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 PCTPQ9UKL6 214 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 NPFFR2Q9Y5X5 522 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.58□□□□□ -0.722e-7■■□□□ 14.1
HMGCS1-204ENST00000507293 DOCK7Q96N67 2140 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 TACC2O95359 2948 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 HSPB2A8KAH6 182 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 KDM4EB2RXH2 506 aaPredicted RBP10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 TRAPPC6AO75865 159 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 SNX4O95219 450 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 ACSL3O95573 720 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 CPMP14384 443 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 GPX3P22352 226 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 UQCRC1P31930 480 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 MAGEA12P43365 314 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 TMED10P49755 219 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 CDK9P50750 372 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 XKP51811 444 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 NRG3P56975 720 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 HSPB2Q16082 182 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 NNATQ16517 81 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 SGO1Q5FBB7 561 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 CCNYL2Q5T2Q4 361 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 FNDC7Q5VTL7 733 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 TNIP2Q8NFZ5 429 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 OR4F6Q8NGB9 312 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 ADIPOR1Q96A54 375 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 NTMT1Q9BV86 223 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 ANGPTL4Q9BY76 406 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 ADAM29Q9UKF5 820 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 TMCO1Q9UM00 188 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 DTX4Q9Y2E6 619 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 C15orf41Q9Y2V0 281 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 SLC6A5Q9Y345 797 aa10.57□□□□□ -0.72
HMGCS1-204ENST00000507293 CELSR1Q9NYQ6 3014 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 AHRRA9YTQ3 701 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 DVL2O14641 736 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 GNB5O14775 395 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 SMIM24O75264 130 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 CTAG2O75638 210 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 EPPINO95925 133 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 HPNP05981 417 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 INHBAP08476 426 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 RPS17P08708 135 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 RBP1P09455 135 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 KRT15P19012 456 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 BMP5P22003 454 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 ABCD3P28288 659 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 CASP3P42574 277 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 KIR2DL3P43628 341 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 ASCL1P50553 236 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 MAPK12P53778 367 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 IST1P53990 364 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 RPP38P78345 283 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 IFT88Q13099 833 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 TOMM20Q15388 145 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 GGTA1PQ4G0N0 100 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 C10orf62Q5T681 223 aaPredicted RBP10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 FAM219BQ5XKK7 198 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 FAM111BQ6SJ93 734 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 RPS27LQ71UM5 84 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 PAGE2Q7Z2X7 111 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 COMMD6Q7Z4G1 85 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 MILR1Q7Z6M3 343 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 PACS2Q86VP3 889 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 LACC1Q8IV20 430 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 MMP21Q8N119 569 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 METTL4Q8N3J2 472 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 OR7G1Q8NGA0 311 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 SLC44A1Q8WWI5 657 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 ISL2Q96A47 359 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 TMEM41AQ96HV5 264 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 GNRHR2Q96P88 292 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 SECISBP2Q96T21 854 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 PAFAH2Q99487 392 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 TIMP4Q99727 224 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 SH3GL2Q99962 352 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 GPATCH1Q9BRR8 931 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 POLDIP3Q9BY77 421 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 FUT8Q9BYC5 575 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 BRINP2Q9C0B6 783 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 NXF5Q9H1B4 397 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 UBQLN3Q9H347 655 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 CDC42EP4Q9H3Q1 356 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 ELOVL6Q9H5J4 265 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 FARSBQ9NSD9 589 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 AHSPQ9NZD4 102 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 CRIM1Q9NZV1 1036 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 SLC12A4Q9UP95 1085 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 CAMK2AQ9UQM7 478 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 PCDHA9Q9Y5H5 950 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 IKBKGQ9Y6K9 419 aa10.56□□□□□ -0.72
HMGCS1-204ENST00000507293 SPG11Q96JI7 2443 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms