RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 KCTD4Q8WVF5 259 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 RBM18Q96H35 190 aaKnown RBP6.45□□□□□ -1.38
VCAN-207ENST00000507162 DGAT2Q96PD7 388 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 PIMREGQ9BSJ6 248 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 ANP32EQ9BTT0 268 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 WWTR1Q9GZV5 400 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 AICDAQ9GZX7 198 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 ACTR8Q9H981 624 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 FOLH1BQ9HBA9 442 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 CHRAC1Q9NRG0 131 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 PLSCR4Q9NRQ2 329 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 CBLN4Q9NTU7 201 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.45□□□□□ -1.38
VCAN-207ENST00000507162 CLEC4AQ9UMR7 237 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 GPR52Q9Y2T5 361 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.45□□□□□ -1.38
VCAN-207ENST00000507162 LRP5LA4QPB2 252 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 GOLGA8KD6RF30 607 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 H0YC42 278 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 GOLGA8TH3BQL2 631 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 PFDN6O15212 129 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 PLGP00747 810 aaPredicted RBP6.44□□□□□ -1.38
VCAN-207ENST00000507162 ESR1P03372 595 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 ALDOAP04075 364 aaKnown RBP6.44□□□□□ -1.38
VCAN-207ENST00000507162 MPC1LP0DKB6 136 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 KRT15P19012 456 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 CCND1P24385 295 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 TTKP33981 857 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 GRIA1P42261 906 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 SLC1A1P43005 524 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 LIMS1P48059 325 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 FABP6P51161 128 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 EFNA4P52798 201 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 TPD52P55327 224 aaPredicted RBP6.44□□□□□ -1.38
VCAN-207ENST00000507162 LIM2P55344 173 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 GFRA1P56159 465 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 CTBP2P56545 445 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 FOXL1Q12952 345 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 RCN2Q14257 317 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 ZNF267Q14586 743 aaPredicted RBP6.44□□□□□ -1.38
VCAN-207ENST00000507162 PON3Q15166 354 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 HLA-DQA1Q5Y7H0 255 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 TRIM40Q6P9F5 258 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 RNF111Q6ZNA4 994 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 DGAT2L6Q6ZPD8 337 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 BEND4Q6ZU67 534 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 BBS12Q6ZW61 710 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 PIWIL4Q7Z3Z4 852 aaKnown RBP6.44□□□□□ -1.38
VCAN-207ENST00000507162 CCDC25Q86WR0 208 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 C1QL4Q86Z23 238 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 KLHDC8BQ8IXV7 354 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 FBXL14Q8N1E6 418 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 NUP43Q8NFH3 380 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 STEAP2Q8NFT2 490 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 HSD17B8Q92506 261 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 GAL3ST3Q96A11 431 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 TSNARE1Q96NA8 513 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 JMJD8Q96S16 334 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 AIF1LQ9BQI0 150 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 PRRG4Q9BZD6 226 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 OR2B2Q9GZK3 357 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 GALNT9Q9HCQ5 603 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 MED29Q9NX70 200 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 ING1Q9UK53 422 aaPredicted RBP6.44□□□□□ -1.38
VCAN-207ENST00000507162 RIMKLBQ9ULI2 386 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 EXO1Q9UQ84 846 aaKnown RBP6.44□□□□□ -1.38
VCAN-207ENST00000507162 PDE10AQ9Y233 779 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 EMC9Q9Y3B6 208 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 TCAF1Q9Y4C2 921 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 SNX8Q9Y5X2 465 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 PTGDR2Q9Y5Y4 395 aa6.44□□□□□ -1.38
VCAN-207ENST00000507162 BIRC6Q9NR09 4857 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 A0A088AWK7 358 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 C2orf92A0A1B0GVN3 265 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 VWC2LB2RUY7 222 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 SHISA9B4DS77 424 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 C3orf80F5H4A9 247 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 SEC14L5O43304 696 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 ICOSLGO75144 302 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 CDH16O75309 829 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 TNFRSF21O75509 655 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 IGKV3-11P04433 115 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 ZNF23P17027 643 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 ZNF10P21506 573 aaPredicted RBP6.43□□□□□ -1.38
VCAN-207ENST00000507162 IL32P24001 234 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 CERS1P27544 350 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 ADH6P28332 368 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 CLCN7P51798 805 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 EEFSECP57772 596 aaKnown RBP6.43□□□□□ -1.38
VCAN-207ENST00000507162 HILS1P60008 231 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 HERVK_113P63132 956 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 ERVK-8P63133 956 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 SCGB2A2Q13296 93 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 TAB1Q15750 504 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 DESI1Q6ICB0 168 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 MRNIPQ6NTE8 343 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 FIGNL1Q6PIW4 674 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 PALM2Q8IXS6 379 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 MPP5Q8N3R9 675 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 SVOPLQ8N434 492 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms