RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 ZADH2Q8N4Q0 377 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 POGLUT1Q8NBL1 392 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 OR56A1Q8NGH5 318 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 SUN3Q8TAQ9 357 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 AGR3Q8TD06 166 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 ZNF721Q8TF20 911 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 TSLPQ969D9 159 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 THOC3Q96J01 351 aaKnown RBP7.88□□□□□ -1.15
PDGFC-205ENST00000506880 AMDHD1Q96NU7 426 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 BTBD9Q96Q07 612 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 SORBS1Q9BX66 1292 aaKnown RBP7.88□□□□□ -1.15
PDGFC-205ENST00000506880 RAD21L1Q9H4I0 556 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 ZNF552Q9H707 407 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-205ENST00000506880 KCNK13Q9HB14 408 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 ZNF160Q9HCG1 818 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 SLCO1B3Q9NPD5 702 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 MAT2BQ9NZL9 334 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 MYOTQ9UBF9 498 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 CORO2BQ9UQ03 480 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 AP3M1Q9Y2T2 418 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 POLR3HQ9Y535 204 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-205ENST00000506880 IGSF10Q6WRI0 2623 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 EXPH5Q8NEV8 1989 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 ZFYVE26Q68DK2 2539 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 TRAV17A0A0B4J275 112 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 ATP6AP2A0A1C7CYW4 349 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 FAM234BA2RU67 622 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 ANKRD33BA6NCL7 494 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 ARGFXA6NJG6 315 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 BBIP1A8MTZ0 92 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 CFLARO15519 480 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 ASNA1O43681 348 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 DIAPH2O60879 1101 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 ERAL1O75616 437 aaKnown RBP7.87□□□□□ -1.15
PDGFC-205ENST00000506880 ATP6AP2O75787 350 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 PGRP06401 933 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 VIMP08670 466 aaKnown RBP7.87□□□□□ -1.15
PDGFC-205ENST00000506880 EPHA3P29320 983 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 PPICP45877 212 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 TRPC1P48995 793 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 ALDH9A1P49189 494 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 PRIM2P49643 509 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 IDH3AP50213 366 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 AQP5P55064 265 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 MLF1P58340 268 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 SNRPNP63162 240 aaKnown RBP7.87□□□□□ -1.15
PDGFC-205ENST00000506880 RNF4P78317 190 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 EEF1A2Q05639 463 aaKnown RBP7.87□□□□□ -1.15
PDGFC-205ENST00000506880 SNTA1Q13424 505 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 RCAN2Q14206 197 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 TLR1Q15399 786 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 CYP27C1Q4G0S4 372 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 ZNF628Q5EBL2 1059 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 PIGGQ5H8A4 983 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 ACER2Q5QJU3 275 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 HLA-DQA1Q5Y7H0 255 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 SCIMPQ6UWF3 145 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 BNC2Q6ZN30 1099 aaPredicted RBP7.87□□□□□ -1.15
PDGFC-205ENST00000506880 LANCL3Q6ZV70 420 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 PRSS58Q8IYP2 241 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 DTWD1Q8N5C7 304 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 CPSF7Q8N684 471 aaKnown RBP7.87□□□□□ -1.15
PDGFC-205ENST00000506880 ZNF615Q8N8J6 731 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 ANKS4BQ8N8V4 417 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 CDRT4Q8N9R6 151 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 TMEM178AQ8NBL3 297 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 TMEM52Q8NDY8 209 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 MIPOL1Q8TD10 442 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 PSMF1Q92530 271 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 PNPLA2Q96AD5 504 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 ELP4Q96EB1 424 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 CCDC115Q96NT0 180 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 MS4A4EQ96PG1 132 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 TSSK3Q96PN8 268 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 STACQ99469 402 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 DUSP26Q9BV47 211 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 EBPLQ9BY08 206 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 OR10A5Q9H207 317 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 POLE3Q9NRF9 147 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 DUSP22Q9NRW4 184 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 PNO1Q9NRX1 252 aaKnown RBP7.87□□□□□ -1.15
PDGFC-205ENST00000506880 CNIH4Q9P003 139 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 SH3BP4Q9P0V3 963 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 HEY2Q9UBP5 337 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 LHX6Q9UPM6 363 aa7.87□□□□□ -1.15
PDGFC-205ENST00000506880 A0A1W2PRB8 838 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 GMNCA6NCL1 334 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 OR5H15A6NDH6 313 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 FRG2CA6NGY1 282 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 TGFBR3LH3BV60 316 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 NDUFAB1O14561 156 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 TP53I11O14683 189 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 EMC8O43402 210 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 SHOX2O60902 331 aaPredicted RBP7.86□□□□□ -1.15
PDGFC-205ENST00000506880 DNAJB6O75190 326 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 SH3BGRLO75368 114 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 SEC24DO94855 1032 aaPredicted RBP7.86□□□□□ -1.15
PDGFC-205ENST00000506880 B3GALT4O96024 378 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 GBAP04062 536 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 NGFRP08138 427 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms