RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 ZNF628Q5EBL2 1059 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 TMEM156Q8N614 296 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 ZNF441Q8N8Z8 693 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 OR5L2Q8NGL0 311 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 OR9A2Q8NGT5 310 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 ZNF675Q8TD23 568 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 PPP1R36Q96LQ0 422 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 GAL3ST4Q96RP7 486 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 C1orf50Q9BV19 199 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 OR10A5Q9H207 317 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 MIEF1Q9NQG6 463 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.89■□□□□ 0.297e-8■■■■■ 55
PDLIM7-216ENST00000506537 ZNF446Q9NWS9 450 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 TAS2R7Q9NYW3 318 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 MAP10Q9P2G4 905 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 ENTPD4Q9Y227 616 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 DTX4Q9Y2E6 619 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 PCDHGB6Q9Y5F9 930 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 COPG1Q9Y678 874 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 FLNCQ14315 2725 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 OR6C76A6NM76 312 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 MYO1GB0I1T2 1018 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 AKAP10O43572 662 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 LRATO95237 230 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 OCRLQ01968 901 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 INAQ16352 499 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 MPEG1Q2M385 716 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 ATP6AP1LQ52LC2 224 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 TRMT12Q53H54 448 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 ZNF385BQ569K4 471 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 PIGGQ5H8A4 983 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 C6orf163Q5TEZ5 329 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 ANKRD26P1Q6NSI1 321 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 LYPD8Q6UX82 237 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 SLC29A4Q7RTT9 530 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 CYP4Z2PQ8N1L4 340 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 OR7G1Q8NGA0 311 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 RAB3IL1Q8TBN0 382 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 GRHL3Q8TE85 626 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 TUBGCP3Q96CW5 907 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 GIMAP4Q9NUV9 329 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 THAP1Q9NVV9 213 aa16.88■□□□□ 0.29
PDLIM7-216ENST00000506537 HMGB1P1B2RPK0 211 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 NME2P1O60361 137 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 SP1P08047 785 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 CD46P15529 392 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 NME2P22392 152 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 SRSF11Q05519 484 aaKnown RBP16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 PDE7AQ13946 482 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 PTGR1Q14914 329 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 SLC25A25Q6KCM7 469 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 GALNTL5Q7Z4T8 443 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 MDGA2Q7Z553 956 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 SAMD14Q8IZD0 417 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 LIX1Q8N485 282 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 HORMAD2Q8N7B1 307 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 FNDC5Q8NAU1 212 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 C16orf52Q8NHV5 167 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 ASB15Q8WXK1 588 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 KAT2AQ92830 837 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 ADIPOR1Q96A54 375 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 ZNF764Q96H86 408 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 C5orf34Q96MH7 638 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 BBS4Q96RK4 519 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 NUF2Q9BZD4 464 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 REEP4Q9H6H4 257 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 MANSC1Q9H8J5 431 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 ANKRA2Q9H9E1 313 aa16.87■□□□□ 0.29
PDLIM7-216ENST00000506537 A8MVJ9 347 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 TBX19O60806 448 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 WISP1O95388 367 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 GPX3P22352 226 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 MAPK1P28482 360 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 UQCRFS1P47985 274 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 FHL5Q5TD97 284 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 IL23RQ5VWK5 629 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 ATG16L1Q676U5 607 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 ZNF324BQ6AW86 544 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 FAM180AQ6UWF9 173 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 IL20RBQ6UXL0 311 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 TRIM42Q8IWZ5 723 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 GPALPP1Q8IXQ4 340 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 FAM9CQ8IZT9 166 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 GOLGA6L1Q8N7Z2 621 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 TMEM178AQ8NBL3 297 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 OR7G2Q8NG99 324 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 OR52R1Q8NGF1 315 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 ZNF75CPQ92670 426 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 CIDECQ96AQ7 238 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 GLIPR2Q9H4G4 154 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 AKTIPQ9H8T0 292 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 MEAF6Q9HAF1 191 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 HPF1Q9NWY4 346 aa16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 MARCOQ9UEW3 520 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-216ENST00000506537 C2orf92A0A1B0GVN3 265 aa16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 TCP11X1B4DZS4 312 aa16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 KLF11O14901 512 aa16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 NME6O75414 186 aaPredicted RBP16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 RASAL1O95294 804 aa16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 NTSP30990 170 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms