RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 UBTD2Q8WUN7 234 aa4.99□□□□□ -1.61
HERC4-213ENST00000506515 POM121L2Q96KW2 1035 aa4.99□□□□□ -1.61
HERC4-213ENST00000506515 ZNF560Q96MR9 790 aa4.99□□□□□ -1.61
HERC4-213ENST00000506515 SPATA13Q96N96 652 aa4.99□□□□□ -1.61
HERC4-213ENST00000506515 DEFB118Q96PH6 123 aa4.99□□□□□ -1.61
HERC4-213ENST00000506515 WWTR1Q9GZV5 400 aa4.99□□□□□ -1.61
HERC4-213ENST00000506515 C11orf49Q9H6J7 331 aa4.99□□□□□ -1.61
HERC4-213ENST00000506515 KCNK13Q9HB14 408 aa4.99□□□□□ -1.61
HERC4-213ENST00000506515 UBE2TQ9NPD8 197 aaPredicted RBP4.99□□□□□ -1.61
HERC4-213ENST00000506515 ZDHHC18Q9NUE0 388 aa4.99□□□□□ -1.61
HERC4-213ENST00000506515 THEGQ9P2T0 379 aa4.99□□□□□ -1.61
HERC4-213ENST00000506515 FETUBQ9UGM5 382 aa4.99□□□□□ -1.61
HERC4-213ENST00000506515 MOSPD1Q9UJG1 213 aa4.99□□□□□ -1.61
HERC4-213ENST00000506515 APPL1Q9UKG1 709 aa4.99□□□□□ -1.61
HERC4-213ENST00000506515 TEX264Q9Y6I9 313 aa4.99□□□□□ -1.61
HERC4-213ENST00000506515 LRRC37AA6NMS7 1700 aa4.99□□□□□ -1.61
HERC4-213ENST00000506515 LAMA3Q16787 3333 aa4.99□□□□□ -1.61
HERC4-213ENST00000506515 PSME4Q14997 1843 aa4.99□□□□□ -1.61
HERC4-213ENST00000506515 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.98□□□□□ -1.61
HERC4-213ENST00000506515 IQCMA0A1B0GVH7 501 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 MEX3AA1L020 520 aaKnown RBP4.98□□□□□ -1.61
HERC4-213ENST00000506515 A8MU76 341 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 MPTX1A8MV57 137 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 FRAT2O75474 233 aaPredicted RBP4.98□□□□□ -1.61
HERC4-213ENST00000506515 MTRF1O75570 445 aaKnown RBP4.98□□□□□ -1.61
HERC4-213ENST00000506515 CPNE6O95741 557 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 ANGPTL1O95841 491 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 EDNRAP25101 427 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 GABPAQ06546 454 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 ZNF177Q13360 481 aaPredicted RBP4.98□□□□□ -1.61
HERC4-213ENST00000506515 VGLL4Q14135 290 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 GCKRQ14397 625 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 STX1AQ16623 288 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 MRGPRG-AS1Q2M3A8 158 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 MOGAT2Q3SYC2 334 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 B3GLCTQ6Y288 498 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 LRRTM1Q86UE6 522 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 METTL4Q8N3J2 472 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 RTL3Q8N8U3 475 aaKnown RBP4.98□□□□□ -1.61
HERC4-213ENST00000506515 OR4A16Q8NH70 328 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 PLEKHF1Q96S99 279 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 SSX3Q99909 188 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 FAM213AQ9BRX8 229 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 MED17Q9NVC6 651 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 SCN9AQ15858 1988 aa4.98□□□□□ -1.61
HERC4-213ENST00000506515 LOC105371242A0A075B767 164 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 CLRN2A0PK11 232 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 KPNA7A9QM74 516 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 RNF103O00237 685 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 FGF19O95750 216 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 ABHD2P08910 425 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 SELEP16581 610 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 STMN1P16949 149 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 TMEM50BP56557 158 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 GSCP56915 257 aaPredicted RBP4.97□□□□□ -1.61
HERC4-213ENST00000506515 FASTKD3Q14CZ7 662 aaKnown RBP4.97□□□□□ -1.61
HERC4-213ENST00000506515 CDC37Q16543 378 aaPredicted RBP4.97□□□□□ -1.61
HERC4-213ENST00000506515 CCDC57Q2TAC2 916 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 C14orf177Q52M58 125 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 ZC2HC1BQ5TFG8 222 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 CAPN13Q6MZZ7 669 aaPredicted RBP4.97□□□□□ -1.61
HERC4-213ENST00000506515 CACUL1Q86Y37 369 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 SIDT2Q8NBJ9 832 aaKnown RBP4.97□□□□□ -1.61
HERC4-213ENST00000506515 OR10G7Q8NGN6 311 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 CCDC47Q96A33 483 aaKnown RBP4.97□□□□□ -1.61
HERC4-213ENST00000506515 EEF2KMTQ96G04 330 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 CXorf58Q96LI9 332 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 LINC00479Q96M42 142 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 AGAP4Q96P64 663 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 SYT11Q9BT88 431 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 FGFBP2Q9BYJ0 223 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 ABCG4Q9H172 646 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 DCLRE1BQ9H816 532 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 MARCH7Q9H992 704 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 PRMT8Q9NR22 394 aaPredicted RBP4.97□□□□□ -1.61
HERC4-213ENST00000506515 NUDT4Q9NZJ9 180 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 HMG20BQ9P0W2 317 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 ASIC3Q9UHC3 531 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 TEKT2Q9UIF3 430 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 MRPS18CQ9Y3D5 142 aaKnown RBP4.97□□□□□ -1.61
HERC4-213ENST00000506515 NCOR1O75376 2440 aa4.97□□□□□ -1.61
HERC4-213ENST00000506515 DUOX1Q9NRD9 1551 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 LAMA2P24043 3122 aaKnown RBP4.96□□□□□ -1.62
HERC4-213ENST00000506515 TLR4O00206 839 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 SLC28A1O00337 649 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 TFECO14948 347 aaPredicted RBP4.96□□□□□ -1.62
HERC4-213ENST00000506515 OGTO15294 1046 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 INPP4BO15327 924 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 TNFSF12O43508 249 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 KRT86O43790 486 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 ZBTB14O43829 449 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 PRDM1O75626 825 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 BCAS2O75934 225 aaPredicted RBP4.96□□□□□ -1.62
HERC4-213ENST00000506515 STIP1P31948 543 aaKnown RBP4.96□□□□□ -1.62
HERC4-213ENST00000506515 HILS1P60008 231 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 CALCOCO2Q13137 446 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 KRT81Q14533 505 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 HEPACAMQ14CZ8 416 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 RFTN2Q52LD8 501 aaPredicted RBP4.96□□□□□ -1.62
HERC4-213ENST00000506515 RABEPKQ7Z6M1 372 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms