RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 ABHD2P08910 425 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 IGFBP2P18065 325 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 NT5EP21589 574 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 ACVR2AP27037 513 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 CHRNB4P30926 498 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 FEN1P39748 380 aaKnown RBP13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 MAN2A2P49641 1150 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 MAPK12P53778 367 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 FBXW4P57775 412 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 KCNJ2P63252 427 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 MAP4K2Q12851 820 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 C10orf62Q5T681 223 aaPredicted RBP13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 DESI1Q6ICB0 168 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 FAM180BQ6P0A1 224 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 SLC48A1Q6P1K1 146 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 MEX3BQ6ZN04 569 aaKnown RBP13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 PAGE2Q7Z2X7 111 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 LIX1LQ8IVB5 337 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 GALNT12Q8IXK2 581 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 TAGAPQ8N103 731 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 CHTF18Q8WVB6 975 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 ASB5Q8WWX0 329 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 ZNF681Q96N22 645 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 HBEGFQ99075 208 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 LDAHQ9H6V9 325 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 TRPS1Q9UHF7 1281 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 ZNF639Q9UID6 485 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 ACAD8Q9UKU7 415 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 DTX4Q9Y2E6 619 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 NPFFR2Q9Y5X5 522 aa13.22□□□□□ -0.29
CDC42SE2-209ENST00000506419 ANKRD33BA6NCL7 494 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 FAM90A27PA6NNH2 459 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 FOXO6A8MYZ6 492 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 SUPT7LO94864 414 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 POU3F2P20265 443 aaPredicted RBP13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 IMPDH1P20839 514 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 ADH7P40394 386 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 SLC29A2Q14542 456 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 PRICKLE4Q2TBC4 344 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 LGSNQ5TDP6 509 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 FNDC7Q5VTL7 733 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 ACAD11Q709F0 780 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 TRMT10CQ7L0Y3 403 aaKnown RBP13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 IFT20Q8IY31 132 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 DND1Q8IYX4 353 aaKnown RBP13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 PRR22Q8IZ63 422 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 C1orf52Q8N6N3 182 aaKnown RBP13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 CDYL2Q8N8U2 506 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 OR7G1Q8NGA0 311 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 SPPL2AQ8TCT8 520 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 MZB1Q8WU39 189 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 JSRP1Q96MG2 331 aaPredicted RBP13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 TMEM237Q96Q45 408 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 SLC6A15Q9H2J7 730 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 ZNF703Q9H7S9 590 aaPredicted RBP13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 BRF2Q9HAW0 419 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 ACKR4Q9NPB9 350 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 ALKBH4Q9NXW9 302 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 HEY2Q9UBP5 337 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 VPS29Q9UBQ0 182 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 SNX6Q9UNH7 406 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 CACNA1CQ13936 2221 aa13.21□□□□□ -0.29
CDC42SE2-209ENST00000506419 TEP1Q99973 2627 aaKnown RBP13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 A0A0G2JNJ9 132 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 C1orf226A1L170 272 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 GOLGA8RI6L899 631 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 ERAL1O75616 437 aaKnown RBP13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 CBX7O95931 251 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 ABCB1P08183 1280 aaPredicted RBP13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 GPX3P22352 226 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 ELAVL4P26378 380 aaKnown RBP13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 SSTR2P30874 369 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 TRPC1P48995 793 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 HTR6P50406 440 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 PRKAA2P54646 552 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 RAE1P78406 368 aaKnown RBP13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 EXOSC7Q15024 291 aaKnown RBP13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 TRMT12Q53H54 448 aaKnown RBP13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 B3GNT6Q6ZMB0 384 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 SEM1Q6ZVN7 128 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 LRRN4CLQ8ND94 238 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 ADCY4Q8NFM4 1077 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 OR10Q1Q8NGQ4 319 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 KIF18AQ8NI77 898 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 DIO2Q92813 273 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 CTHRC1Q96CG8 243 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 MTBPQ96DY7 904 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 C14orf79Q96F83 325 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 CNRIP1Q96F85 164 aaPredicted RBP13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 GNRHR2Q96P88 292 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 DOHHQ9BU89 302 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 ANGPTL4Q9BY76 406 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 NXF5Q9H1B4 397 aaKnown RBP13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 KCNJ16Q9NPI9 418 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 MAT2BQ9NZL9 334 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 Q9UFV3 132 aa13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 BOKQ9UMX3 212 aaPredicted RBP13.2□□□□□ -0.3
CDC42SE2-209ENST00000506419 A0A1W2PPM1 405 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 KDM4EB2RXH2 506 aaPredicted RBP13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 RHOXF2BP0C7M4 288 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms