RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 FAM205AQ6ZU69 1335 aa2.85□□□□□ -1.95
CHD1-203ENST00000505657 RTN2O75298 545 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 IGHV3-9P01782 118 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 HMOX1P09601 288 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 CASP3P42574 277 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 TNFRSF4P43489 277 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 PITPNBP48739 271 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 LASP1Q14847 261 aaKnown RBP2.84□□□□□ -1.95
CHD1-203ENST00000505657 GPAT3Q53EU6 434 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 PRR30Q53SZ7 412 aaPredicted RBP2.84□□□□□ -1.95
CHD1-203ENST00000505657 TCHHL1Q5QJ38 904 aaPredicted RBP2.84□□□□□ -1.95
CHD1-203ENST00000505657 B3GLCTQ6Y288 498 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 RAPH1Q70E73 1250 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 MOB2Q70IA6 237 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 P3H4Q92791 437 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 RAB39BQ96DA2 213 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 CFAP36Q96G28 342 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 SERAC1Q96JX3 654 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 RPGRIP1Q96KN7 1286 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 GPR137Q96N19 417 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 SPAG8Q99932 426 aaPredicted RBP2.84□□□□□ -1.95
CHD1-203ENST00000505657 ELL3Q9HB65 397 aaPredicted RBP2.84□□□□□ -1.95
CHD1-203ENST00000505657 KCNMB3Q9NPA1 279 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 NARFQ9UHQ1 456 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 KLHDC2Q9Y2U9 406 aa2.84□□□□□ -1.95
CHD1-203ENST00000505657 IGHV3OR16-12A0A075B7B8 117 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 A0A0A6YYD4 124 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 TLR4O00206 839 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 KINO60870 393 aaKnown RBP2.83□□□□□ -1.96
CHD1-203ENST00000505657 GOSR1O95249 250 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 CXCL14O95715 111 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 SFTPBP07988 381 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 MMP10P09238 476 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 VDRP11473 427 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 FCARP24071 287 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 MAT2AP31153 395 aaKnown RBP2.83□□□□□ -1.96
CHD1-203ENST00000505657 RPL34P49207 117 aaKnown RBP2.83□□□□□ -1.96
CHD1-203ENST00000505657 ARHGDIAP52565 204 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 NDST1P52848 882 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 SLC12A3P55017 1021 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 KRTAP12-2P59991 146 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 PPIAP62937 165 aaKnown RBP2.83□□□□□ -1.96
CHD1-203ENST00000505657 CXCL6P80162 114 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 PAX2Q02962 417 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 ZNF33BQ06732 778 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 MORF4L2Q15014 288 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 TGIF1Q15583 401 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 PPP1R3AQ16821 1122 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 HFEQ30201 348 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 CNPY1Q3B7I2 92 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 MARC1Q5VT66 337 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 PRAMEF7Q5VXH5 474 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 NKAIN2Q5VXU1 208 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 CCDC91Q7Z6B0 441 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 ZNF410Q86VK4 478 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 SLC22A16Q86VW1 577 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 C10orf53Q8N6V4 93 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 ZNF713Q8N859 430 aaPredicted RBP2.83□□□□□ -1.96
CHD1-203ENST00000505657 GPATCH11Q8N954 259 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 RDH11Q8TC12 318 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 CNOT6LQ96LI5 555 aaKnown RBP2.83□□□□□ -1.96
CHD1-203ENST00000505657 DCTPP1Q9H773 170 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 NRN1Q9NPD7 142 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 ARGLU1Q9NWB6 273 aaPredicted RBP2.83□□□□□ -1.96
CHD1-203ENST00000505657 PRODH2Q9UF12 536 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 KIF25-AS1Q9Y6Z4 181 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 AFF2P51816 1311 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 NPC1L1Q9UHC9 1359 aa2.83□□□□□ -1.96
CHD1-203ENST00000505657 TRABD2BA6NFA1 517 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 CCDC69A6NI79 296 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 LRP3O75074 770 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 GOT2P00505 430 aaKnown RBP2.82□□□□□ -1.96
CHD1-203ENST00000505657 WNT2P09544 360 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 ACADSBP45954 432 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 ZNF131P52739 623 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 HAND2P61296 217 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 TEFQ10587 303 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 SLC10A1Q14973 349 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 HAGHQ16775 308 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 HKDC1Q2TB90 917 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 DDI2Q5TDH0 399 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 APOOLQ6UXV4 268 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 LUZP1Q86V48 1076 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 CNTN4Q8IWV2 1026 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 ARL14Q8N4G2 192 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 KRT35Q92764 455 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 DTD2Q96FN9 168 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 ACCSQ96QU6 501 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 GPR174Q9BXC1 333 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 DEFB126Q9BYW3 111 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 ABCB10Q9NRK6 738 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.82□□□□□ -1.96
CHD1-203ENST00000505657 PIGVQ9NUD9 493 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 AKAP7Q9P0M2 348 aaPredicted RBP2.82□□□□□ -1.96
CHD1-203ENST00000505657 TUBGCP4Q9UGJ1 667 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 EMCNQ9ULC0 261 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 KLF2Q9Y5W3 355 aaPredicted RBP2.82□□□□□ -1.96
CHD1-203ENST00000505657 TEX264Q9Y6I9 313 aa2.82□□□□□ -1.96
CHD1-203ENST00000505657 ATP6V1G1O75348 118 aa2.81□□□□□ -1.96
CHD1-203ENST00000505657 SLC35E2P0CK97 266 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms