RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 IKZF5Q9H5V7 419 aa4.6□□□□□ -1.67
LMNB1-208ENST00000504788 CXorf36Q9H7Y0 433 aa4.6□□□□□ -1.67
LMNB1-208ENST00000504788 PFDN4Q9NQP4 134 aa4.6□□□□□ -1.67
LMNB1-208ENST00000504788 SLC25A37Q9NYZ2 338 aa4.6□□□□□ -1.67
LMNB1-208ENST00000504788 FBXL4Q9UKA2 621 aa4.6□□□□□ -1.67
LMNB1-208ENST00000504788 EIF3LQ9Y262 564 aaKnown RBP4.6□□□□□ -1.67
LMNB1-208ENST00000504788 PADI2Q9Y2J8 665 aa4.6□□□□□ -1.67
LMNB1-208ENST00000504788 A0A087WV62 115 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 PRSS51A0A1B0GVH4 220 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 A0A1W2PP18 115 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 FAM234BA2RU67 622 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 PRAMEF27A3QJZ7 478 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 C17orf105B2RV13 164 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 B4DXG7 233 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 K7EM74 188 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 PSMD12O00232 456 aaPredicted RBP4.59□□□□□ -1.67
LMNB1-208ENST00000504788 FCHO1O14526 889 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 SLC22A2O15244 555 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 GUCY1B2O75343 617 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 ERAL1O75616 437 aaKnown RBP4.59□□□□□ -1.67
LMNB1-208ENST00000504788 SLC22A3O75751 556 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 MYO1DO94832 1006 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 SEC24DO94855 1032 aaPredicted RBP4.59□□□□□ -1.67
LMNB1-208ENST00000504788 NADKO95544 446 aaPredicted RBP4.59□□□□□ -1.67
LMNB1-208ENST00000504788 HPP00738 406 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 IGHEP01854 428 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 PDGFAP04085 211 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 HEXBP07686 556 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 TROVE2P10155 538 aaKnown RBP eCLIP4.59□□□□□ -1.67
LMNB1-208ENST00000504788 ITGAMP11215 1152 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 CSNK2A2P19784 350 aaPredicted RBP4.59□□□□□ -1.67
LMNB1-208ENST00000504788 PIK3R1P27986 724 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 TLX1P31314 330 aaPredicted RBP4.59□□□□□ -1.67
LMNB1-208ENST00000504788 SSTR4P31391 388 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 MC3RP41968 323 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 KIR3DL1P43629 444 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 POLR2JP52435 117 aaKnown RBP4.59□□□□□ -1.67
LMNB1-208ENST00000504788 NME5P56597 212 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 SRSF11Q05519 484 aaKnown RBP4.59□□□□□ -1.67
LMNB1-208ENST00000504788 EEF1A2Q05639 463 aaKnown RBP4.59□□□□□ -1.67
LMNB1-208ENST00000504788 KLF10Q13118 480 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 SERTAD2Q14140 314 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 SQLEQ14534 574 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 EBPQ15125 230 aaKnown RBP4.59□□□□□ -1.67
LMNB1-208ENST00000504788 GTDC1Q4AE62 458 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 C6orf89Q6UWU4 347 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 ACAD11Q709F0 780 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 NDUFAF7Q7L592 441 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 MTDHQ86UE4 582 aaKnown RBP4.59□□□□□ -1.67
LMNB1-208ENST00000504788 MIER2Q8N344 545 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 LRRC25Q8N386 305 aaPredicted RBP4.59□□□□□ -1.67
LMNB1-208ENST00000504788 DPP10Q8N608 796 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 MORN4Q8NDC4 146 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 FBXO27Q8NI29 283 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 SLC2A12Q8TD20 617 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 DOK4Q8TEW6 326 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 TSPEARQ8WU66 669 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 RNF138Q8WVD3 245 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 THAP4Q8WY91 577 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 TTC9Q92623 222 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 ZDHHC16Q969W1 377 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 PPCDCQ96CD2 204 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 FAM120BQ96EK7 910 aaKnown RBP4.59□□□□□ -1.67
LMNB1-208ENST00000504788 VSTM2LQ96N03 204 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 INPP5KQ9BT40 448 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 TUBB6Q9BUF5 446 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 EFHD1Q9BUP0 239 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 DUSP26Q9BV47 211 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 FAIM2Q9BWQ8 316 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 DPY30Q9C005 99 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 ZNF552Q9H707 407 aaPredicted RBP4.59□□□□□ -1.67
LMNB1-208ENST00000504788 ZBTB20Q9HC78 741 aaPredicted RBP4.59□□□□□ -1.67
LMNB1-208ENST00000504788 MMP25Q9NPA2 562 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 CCDC167Q9P0B6 97 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 VAPAQ9P0L0 249 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 ARMCX1Q9P291 453 aa4.59□□□□□ -1.67
LMNB1-208ENST00000504788 C19orf53Q9UNZ5 99 aaPredicted RBP4.59□□□□□ -1.67
LMNB1-208ENST00000504788 MRPS33Q9Y291 106 aaKnown RBP4.59□□□□□ -1.67
LMNB1-208ENST00000504788 HEATR5AQ86XA9 2040 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 SYNDIG1LA6NDD5 238 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 ZNF891A8MT65 544 aaPredicted RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 PDPK1O15530 556 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 SLITRK5O94991 958 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 ZIC2O95409 532 aaPredicted RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 C6orf47O95873 294 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 IL6P05231 212 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 ZCCHC18P0CG32 403 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 COX7A2P14406 83 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 OTX2P32243 289 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 MPIP34949 423 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 CD97P48960 835 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 ALDH9A1P49189 494 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 CLNS1AP54105 237 aaKnown RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 OR4D2P58180 307 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 PLIN5Q00G26 463 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 ACTN3Q08043 901 aaPredicted RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 VAC14Q08AM6 782 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 FUT5Q11128 374 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 VPS26BQ4G0F5 336 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 TIGD2Q4W5G0 525 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms