RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 POLE2P56282 527 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 HSD17B7P56937 341 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 SKP1P63208 163 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 MRPS22P82650 360 aaKnown RBP9.72□□□□□ -0.85
TPM3-217ENST00000504663 RHDQ02161 417 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 MYBPC3Q14896 1274 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 ISXQ2M1V0 245 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 TRMT12Q53H54 448 aaKnown RBP9.72□□□□□ -0.85
TPM3-217ENST00000504663 IRAK1BP1Q5VVH5 260 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 ZNF517Q6ZMY9 492 aaPredicted RBP9.72□□□□□ -0.85
TPM3-217ENST00000504663 QSOX2Q6ZRP7 698 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 DHFR2Q86XF0 187 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 GPR135Q8IZ08 494 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 LILRA2Q8N149 483 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 TRIML2Q8N7C3 387 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 ZSCAN1Q8NBB4 408 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 AGBL5Q8NDL9 886 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 HIPK4Q8NE63 616 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 DOK4Q8TEW6 326 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 PYDC1Q8WXC3 89 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 N4BP2L2Q92802 583 aaPredicted RBP9.72□□□□□ -0.85
TPM3-217ENST00000504663 PPWD1Q96BP3 646 aaKnown RBP9.72□□□□□ -0.85
TPM3-217ENST00000504663 C16orf58Q96GQ5 468 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 LIN37Q96GY3 246 aaPredicted RBP9.72□□□□□ -0.85
TPM3-217ENST00000504663 SLC35G5Q96KT7 338 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 MESP1Q9BRJ9 268 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 NDC1Q9BTX1 674 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 SPATA9Q9BWV2 254 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 SPRY4Q9C004 299 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 TGIF2Q9GZN2 237 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 TMEM38AQ9H6F2 299 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 ZNF304Q9HCX3 659 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 ZCCHC3Q9NUD5 404 aaKnown RBP9.72□□□□□ -0.85
TPM3-217ENST00000504663 OLAHQ9NV23 265 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 C19orf53Q9UNZ5 99 aaPredicted RBP9.72□□□□□ -0.85
TPM3-217ENST00000504663 MMACHCQ9Y4U1 282 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 KCNE3Q9Y6H6 103 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 ZNF780BQ9Y6R6 833 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 SPACA6W5XKT8 324 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 SDK2Q58EX2 2172 aa9.71□□□□□ -0.85
TPM3-217ENST00000504663 A0A087WV62 115 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 EVPLLA8MZ36 301 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 EMC8O43402 210 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 CREG1O75629 220 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 KRT75O95678 551 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 HMGN2P05204 90 aaKnown RBP9.71□□□□□ -0.86
TPM3-217ENST00000504663 TFPTP0C1Z6 253 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 ACP2P11117 423 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 CSTF2P33240 577 aaKnown RBP eCLIP9.71□□□□□ -0.86
TPM3-217ENST00000504663 MPIP34949 423 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 STT3AP46977 705 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 E2F1Q01094 437 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 MAP4K2Q12851 820 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 VEZF1Q14119 521 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 IL11RAQ14626 422 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 RCN1Q15293 331 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 NKAIN1Q4KMZ8 207 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 VWA2Q5GFL6 755 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 GCNT6Q5T4J0 391 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 ARHGAP40Q5TG30 622 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 GLYATQ6IB77 296 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 MFSD12Q6NUT3 480 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 MRPL14Q6P1L8 145 aaKnown RBP9.71□□□□□ -0.86
TPM3-217ENST00000504663 TNFAIP8L2Q6P589 184 aaPredicted RBP9.71□□□□□ -0.86
TPM3-217ENST00000504663 AAGABQ6PD74 315 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 FAM198BQ6UWH4 519 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 GALNT10Q86SR1 603 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 LAPTM4BQ86VI4 370 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 BPHLQ86WA6 291 aaPredicted RBP9.71□□□□□ -0.86
TPM3-217ENST00000504663 PPP1R3BQ86XI6 285 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 SPPL2CQ8IUH8 684 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 TMEM126BQ8IUX1 230 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 C10orf67Q8IYJ2 551 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 SAMD14Q8IZD0 417 aaPredicted RBP9.71□□□□□ -0.86
TPM3-217ENST00000504663 ST13P4Q8IZP2 240 aaPredicted RBP9.71□□□□□ -0.86
TPM3-217ENST00000504663 LGI4Q8N135 537 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 AMER2Q8N7J2 671 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 GOLM1Q8NBJ4 401 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 PAPD5Q8NDF8 572 aaKnown RBP9.71□□□□□ -0.86
TPM3-217ENST00000504663 DEFB124Q8NES8 71 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 OR56A1Q8NGH5 318 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 OR5D16Q8NGK9 328 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 NETO1Q8TDF5 533 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 CANT1Q8WVQ1 401 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 NRG4Q8WWG1 115 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 MOAP1Q96BY2 351 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 LRFN5Q96NI6 719 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 SPSB2Q99619 263 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 IRF2BPLQ9H1B7 796 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 SLC26A1Q9H2B4 701 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 OR51I1Q9H343 314 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 CXorf21Q9HAI6 301 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 A4GALTQ9NPC4 353 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 SEMA3GQ9NS98 782 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 GIMAP4Q9NUV9 329 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 PTGFRNQ9P2B2 879 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 TRPC4Q9UBN4 977 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 NDOR1Q9UHB4 597 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 RIMS3Q9UJD0 308 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 PSME2Q9UL46 239 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms