RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 MARCH11A6NNE9 402 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 H3BQV1 296 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 RRHO14718 337 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 CHUKO15111 745 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 SRPX2O60687 465 aaPredicted RBP4.82□□□□□ -1.64
NIPBL-204ENST00000504430 DFFBO76075 338 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 CDH5P33151 784 aaPredicted RBP4.82□□□□□ -1.64
NIPBL-204ENST00000504430 ZNF415Q09FC8 603 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 PDK2Q15119 407 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 STX1AQ16623 288 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 PHLDA2Q53GA4 152 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 SLX4IPQ5VYV7 408 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 SLC35D2Q76EJ3 337 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 FBXO36Q8NEA4 188 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 OR4L1Q8NH43 312 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 ENKURQ8TC29 256 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 FBXO17Q96EF6 278 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 ZNF274Q96GC6 653 aaPredicted RBP4.82□□□□□ -1.64
NIPBL-204ENST00000504430 HPDLQ96IR7 371 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 NPFFR1Q9GZQ6 430 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 ESRP2Q9H6T0 727 aaKnown RBP4.82□□□□□ -1.64
NIPBL-204ENST00000504430 BEX1Q9HBH7 125 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 SLC2A4RGQ9NR83 387 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 NDRG3Q9UGV2 375 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 UTYO14607 1347 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 KCNN4O15554 427 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 B4GAT1O43505 415 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 LATO43561 262 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 OR2F2O95006 317 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 HLA-DOAP06340 250 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 ZNF7P17097 686 aaPredicted RBP4.82□□□□□ -1.64
NIPBL-204ENST00000504430 UGT1A4P22310 534 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 SRD5A2P31213 254 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 UGT1A3P35503 534 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 UGT1A5P35504 534 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 GDNFP39905 211 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 ACADSBP45954 432 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 RAB14P61106 215 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 CSNK1G2P78368 415 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 CSTF1Q05048 431 aaKnown RBP4.82□□□□□ -1.64
NIPBL-204ENST00000504430 KIAA1755Q5JYT7 1200 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 MARCH8Q5T0T0 291 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 LGSNQ5TDP6 509 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 BSPRYQ5W0U4 402 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 OR4F3Q6IEY1 312 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 ZNF425Q6IV72 752 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 HPS6Q86YV9 775 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 RELL2Q8NC24 303 aaPredicted RBP4.82□□□□□ -1.64
NIPBL-204ENST00000504430 CA5BP1Q8WTZ4 195 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 SEPHS2Q99611 448 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 APOL2Q9BQE5 337 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 DPH7Q9BTV6 452 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 ALOXE3Q9BYJ1 711 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 C1orf198Q9H425 327 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 HINT3Q9NQE9 182 aaKnown RBP4.82□□□□□ -1.64
NIPBL-204ENST00000504430 PIPOXQ9P0Z9 390 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 WDR83OSQ9Y284 106 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 AP3M1Q9Y2T2 418 aa4.82□□□□□ -1.64
NIPBL-204ENST00000504430 MYOCOSA0A1B0GUC4 107 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 SH3PXD2BA1X283 911 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 TUBAL3A6NHL2 446 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 GMDSO60547 372 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 RNASE1P07998 156 aaKnown RBP4.81□□□□□ -1.64
NIPBL-204ENST00000504430 OR2T7P0C7T2 308 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 MCF2P10911 925 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 PRPS1P60891 318 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 HERVK_113P63132 956 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 ERVK-25P63136 954 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 FOXL1Q12952 345 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 PLA2G7Q13093 441 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 FAM171BQ6P995 826 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 TUBA3EQ6PEY2 450 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 ZNF474Q6S9Z5 364 aaPredicted RBP4.81□□□□□ -1.64
NIPBL-204ENST00000504430 TMEM107Q6UX40 140 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 CD163Q86VB7 1156 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 PARGQ86W56 976 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 ACVR1CQ8NER5 493 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 GTF2H4Q92759 462 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 OSBPL9Q96SU4 736 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 PRMT1Q99873 361 aaKnown RBP4.81□□□□□ -1.64
NIPBL-204ENST00000504430 ERVK-6Q9BXR3 956 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 AAMDCQ9H7C9 122 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 SLC52A3Q9NQ40 469 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 MBNL3Q9NUK0 354 aaKnown RBP4.81□□□□□ -1.64
NIPBL-204ENST00000504430 FZD4Q9ULV1 537 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 RAP2CQ9Y3L5 183 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 MROH7-TTC4A0A0A0MT08 1334 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 NPIPA5A0A0B4J1W7 369 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 A0A0G2JK05 382 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 A0A1W2PQ72 361 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 A8MX80 341 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 E5RGE8 158 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 NPIPA5E9PKD4 350 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 NPIPA3F8WFD2 350 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 NME2P1O60361 137 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 LRCH4O75427 683 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 RAB3DO95716 219 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 IGLV1-40P01703 118 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 ANXA5P08758 320 aa4.81□□□□□ -1.64
NIPBL-204ENST00000504430 ATP1B2P14415 290 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms