RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 ATXN1P54253 815 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 MAZP56270 477 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 MTPNP58546 118 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CDC42P60953 191 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 SEC61A1P61619 476 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 SNRPEP62304 92 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 RPS27AP62979 156 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 UBA52P62987 128 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 SLC6A3Q01959 620 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 TNFRSF17Q02223 184 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 RPL6Q02878 288 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 TAP2Q03519 686 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 PTPN11Q06124 597 aaPredicted RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 IL10RBQ08334 325 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 TCP10Q12799 353 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 COL9A2Q14055 689 aaPredicted RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 IL18Q14116 193 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 VEZF1Q14119 521 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 LRRC32Q14392 662 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CSHL1Q14406 222 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 HABP2Q14520 560 aaPredicted RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 PTPRRQ15256 657 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 SGO1Q5FBB7 561 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 XKR3Q5GH77 459 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 SAPCD1Q5SSQ6 148 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 PRAMEF19Q5SWL8 479 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 THEM4Q5T1C6 240 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CERCAMQ5T4B2 595 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 DCAF15Q66K64 600 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 PRR5LQ6MZQ0 368 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 KIAA1161Q6NSJ0 714 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 TRNP1Q6NT89 227 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 LCLAT1Q6UWP7 414 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 VITQ6UXI7 678 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 NPSR1Q6W5P4 371 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 QSOX2Q6ZRP7 698 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 TMUB2Q71RG4 321 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CBLL1Q75N03 491 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 SERPINA11Q86U17 422 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 GLCCI1Q86VQ1 547 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 ANKRD46Q86W74 232 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 LRRC28Q86X40 367 aaPredicted RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 ANGPTL5Q86XS5 388 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 KLBQ86Z14 1044 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 SERPINA12Q8IW75 414 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 MFSD6LQ8IWD5 586 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 OR6V1Q8N148 313 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 RASGEF1AQ8N9B8 481 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 L3MBTL4Q8NA19 623 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 GPR26Q8NDV2 337 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 BEND2Q8NDZ0 799 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 BPIFCQ8NFQ6 507 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 OR56A4Q8NGH8 313 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 OR10A6Q8NH74 314 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 COQ8AQ8NI60 647 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 NETO1Q8TDF5 533 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 XAGE5Q8WWM1 108 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 NR4A3Q92570 626 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 RAB24Q969Q5 203 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 RNF166Q96A37 237 aaPredicted RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 MALSU1Q96EH3 234 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 C14orf144Q96I85 54 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 ZC3H10Q96K80 434 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 MTERF1Q99551 399 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 TSNAXQ99598 290 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 ELF4Q99607 663 aaPredicted RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 ATF6BQ99941 703 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 ZNF559Q9BR84 538 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CPPED1Q9BRF8 314 aaPredicted RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 UTP23Q9BRU9 249 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 THAP7Q9BT49 309 aaPredicted RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CRB3Q9BUF7 120 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 THUMPD3Q9BV44 507 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 DUSP26Q9BV47 211 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 IFT27Q9BW83 186 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 SORBS1Q9BX66 1292 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CACNG6Q9BXT2 260 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 DUSP15Q9H1R2 295 aaPredicted RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 ABCG5Q9H222 651 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 TMEM134Q9H6X4 195 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 TUBA4BQ9H853 241 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CDHR5Q9HBB8 845 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 AGO4Q9HCK5 861 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 JPH1Q9HDC5 661 aaPredicted RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 SLC6A20Q9NP91 592 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 C1GALT1Q9NS00 363 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 MS4A12Q9NXJ0 267 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 RASL12Q9NYN1 266 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 LRFN2Q9ULH4 789 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CBLCQ9ULV8 474 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 GABRQQ9UN88 632 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CLCA2Q9UQC9 943 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 GPR52Q9Y2T5 361 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 AAR2Q9Y312 384 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 RPL36Q9Y3U8 105 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CHTOPQ9Y3Y2 248 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 QSER1Q2KHR3 1735 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 GLTPD2A6NH11 291 aa5.67□□□□□ -1.5
LINC01340-201ENST00000504012 COLCA2A8K830 154 aa5.67□□□□□ -1.5
LINC01340-201ENST00000504012 WASH3PC4AMC7 463 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms