RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 GPRC5BQ9NZH0 403 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 PTBP2Q9UKA9 531 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 CDC42EP3Q9UKI2 254 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 ZNF490Q9ULM2 529 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 RTCAO00442 366 aaKnown RBP14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 PLOD2O00469 737 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 HS3ST1O14792 307 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 CLGNO14967 610 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 TGM6O95932 706 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 KRT15P19012 456 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 SLC6A12P48065 614 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 OCRLQ01968 901 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 MILR1Q7Z6M3 343 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 MAIP1Q8WWC4 291 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 CTHRC1Q96CG8 243 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 SIGLEC10Q96LC7 697 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 C19orf24Q9BVV8 132 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 PHACTR1Q9C0D0 580 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 EHD1Q9H4M9 534 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 ACTR8Q9H981 624 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 RNF112Q9ULX5 631 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 LAMP3Q9UQV4 416 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 DLGAP4Q9Y2H0 992 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 VWA7Q9Y334 891 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 OARD1Q9Y530 152 aa14.33□□□□□ -0.12
PDLIM7-210ENST00000503827 NPEPPSL1A6NEC2 478 aa14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 HCRTR2O43614 444 aa14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 CBR3O75828 277 aa14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 SCELO95171 688 aa14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 TLX1P31314 330 aaPredicted RBP14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 ANP32AP39687 249 aaKnown RBP14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 SSR2P43308 183 aa14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 STARP49675 285 aa14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 FUT7Q11130 342 aa14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 SLAMF1Q13291 335 aa14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 C18orf21Q32NC0 220 aaPredicted RBP14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 TMEM35AQ53FP2 167 aa14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 ANKRD34AQ69YU3 496 aa14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 FAM45BPQ6NSW5 357 aa14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 SLC30A6Q6NXT4 461 aa14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 AAGABQ6PD74 315 aa14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 FRA10AC1Q70Z53 315 aa14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 CHMP1BQ7LBR1 199 aa14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 IFNEQ86WN2 208 aa14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 AGGF1Q8N302 714 aaeCLIP14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 FAM45AQ8TCE6 357 aa14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 PTCD3Q96EY7 689 aaKnown RBP14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 OR2B2Q9GZK3 357 aa14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 CORO1CQ9ULV4 474 aaPredicted RBP14.32□□□□□ -0.12
PDLIM7-210ENST00000503827 CLPSP04118 112 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 RHOXF2BP0C7M4 288 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 TBXA2RP21731 343 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 MAGEA3P43357 314 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 LHX2P50458 406 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 GFRA1P56159 465 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 RPS13P62277 151 aaKnown RBP14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 CRYMQ14894 314 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 HIST2H2ACQ16777 129 aaPredicted RBP14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 HIST2H2AA3Q6FI13 130 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 C22orf34Q6ZV56 151 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 PRR22Q8IZ63 422 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 RDH11Q8TC12 318 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 RHBDF1Q96CC6 855 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 REPS1Q96D71 796 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 ZNF845Q96IR2 970 aaPredicted RBP14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 EFCAB11Q9BUY7 163 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 MS4A8Q9BY19 250 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 TRIM5Q9C035 493 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 KLHL4Q9C0H6 718 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 SERHLQ9NQF3 203 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 PHF11Q9UIL8 331 aa14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 EXO1Q9UQ84 846 aaKnown RBP14.31□□□□□ -0.12
PDLIM7-210ENST00000503827 FRG2CA6NGY1 282 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 KLF4O43474 513 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 GPR75O95800 540 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 PLAUP00749 431 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 KRT14P02533 472 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 ZNF708P17019 499 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 ZNF37AP17032 561 aaPredicted RBP14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 PGAM1P18669 254 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 SSTR4P31391 388 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 GALNSP34059 522 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 GMPRP36959 345 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 KIR2DL2P43627 348 aaPredicted RBP14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 SIRPAP78324 504 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 TNFRSF17Q02223 184 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 LAPTM5Q13571 262 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 DOC2AQ14183 400 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 PAGE2BQ5JRK9 111 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 C18orf63Q68DL7 685 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 TMEM81Q6P7N7 255 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 GALNT7Q86SF2 657 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 GPR180Q86V85 440 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 CNTN4Q8IWV2 1026 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 NKAPQ8N5F7 415 aaKnown RBP14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 RNF10Q8N5U6 811 aaKnown RBP14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 OSBPL11Q9BXB4 747 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 BEX2Q9BXY8 128 aa14.3□□□□□ -0.12
PDLIM7-210ENST00000503827 DNAJC11Q9NVH1 559 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms