RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 NPRL3Q12980 569 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 SPHARQ15513 63 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 HMGN3Q15651 99 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 ARHGAP15Q53QZ3 475 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 XKR9Q5GH70 373 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 NOMO2Q5JPE7 1267 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 TMEM198Q66K66 360 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 LPCAT3Q6P1A2 487 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 LAYNQ6UX15 382 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 AHSA2Q719I0 299 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 MAVSQ7Z434 540 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 WDR53Q7Z5U6 358 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 OR8H3Q8N146 312 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 C2orf69Q8N8R5 385 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 OR5M9Q8NGP3 310 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 NEDD4LQ96PU5 975 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 S100A13Q99584 98 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 PPIL3Q9H2H8 161 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 MFSD1Q9H3U5 465 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 IL1RAPQ9NPH3 570 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 CMTM6Q9NX76 183 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 PSORS1C1Q9UIG5 152 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 TUBD1Q9UJT1 453 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 NCKAP1Q9Y2A7 1128 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 SAMHD1Q9Y3Z3 626 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 PCDHB14Q9Y5E9 798 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 NUBP2Q9Y5Y2 271 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 GOLGA4Q13439 2230 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 SNRNP200O75643 2136 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 PCNTO95613 3336 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 DNAH12Q6ZR08 3092 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 UBA6A0AVT1 1052 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 FAM149AA5PLN7 773 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 HMSDA8MTL9 139 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 LCMT2O60294 686 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 MMP20O60882 483 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 AP2A2O94973 939 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 TRUB2O95900 331 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 IFNGP01579 166 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 SOD2P04179 222 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 SLC2A1P11166 492 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 TSPAN8P19075 237 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 GGT1P19440 569 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 GPX3P22352 226 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 RPL3P39023 403 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 RFC3P40938 356 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 ETV5P41161 510 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 ALDH3B1P43353 468 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 MAPK8P45983 427 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 UBE2IP63279 158 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 CCNA1P78396 465 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 ABATP80404 500 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 SLC6A3Q01959 620 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 MLLT11Q13015 90 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 SMCO1Q147U7 214 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 EIF2S3LQ2VIR3 472 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 ZIK1Q3SY52 487 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 KLHL22Q53GT1 634 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 SPIN4Q56A73 249 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 SLC25A53Q5H9E4 307 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 SH3PXD2AQ5TCZ1 1133 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 CDC73Q6P1J9 531 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 HAGHLQ6PII5 290 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 GALNT10Q86SR1 603 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 C12orf40Q86WS4 652 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 WDSUB1Q8N9V3 476 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 PPHLN1Q8NEY8 458 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 OR5J2Q8NH18 312 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 SFT2D1Q8WV19 159 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 EDEM1Q92611 657 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 RNFT2Q96EX2 444 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 NARS2Q96I59 477 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 FYTTD1Q96QD9 318 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 CSF3RQ99062 836 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 TTPALQ9BTX7 342 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 GSDMCQ9BYG8 508 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 C20orf27Q9GZN8 174 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 SLC25A32Q9H2D1 315 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 ZNF395Q9H8N7 513 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 CISHQ9NSE2 258 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 NLE1Q9NVX2 485 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 KLQ9UEF7 1012 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 PILRAQ9UKJ1 303 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 POMT2Q9UKY4 750 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 FLNBO75369 2602 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 RPS10-NUDT3A0A1W2PQS6 291 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 DISC1C4P0D8 188 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 PDCD5O14737 125 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 ZBTB7AO95365 584 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 GLUD1P00367 558 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 GOT2P00505 430 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 SRPRAP08240 638 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 UROSP10746 265 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 ICAM2P13598 275 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 TAS2R39P59534 338 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 RPS7P62081 194 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 PITPNAQ00169 270 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 IL10RBQ08334 325 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 PICALMQ13492 652 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 MEP1AQ16819 746 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms