RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 TEKT2Q9UIF3 430 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 PCDHGB7Q9Y5F8 929 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 WWP2O00308 870 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 KLHL41O60662 606 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 PRPS1L1P21108 318 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 MDH1P40925 334 aaKnown RBP15.31■□□□□ 0.04
SCLT1-205ENST00000503401 CLDN8P56748 225 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 ARG2P78540 354 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 MAP4K2Q12851 820 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 SF3A3Q12874 501 aaKnown RBP eCLIP15.31■□□□□ 0.04
SCLT1-205ENST00000503401 DUSP8Q13202 625 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 NADK2Q4G0N4 442 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 R3HCC1LQ7Z5L2 792 aaKnown RBP15.31■□□□□ 0.04
SCLT1-205ENST00000503401 LRRC34Q8IZ02 419 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 FAM9CQ8IZT9 166 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 CATSPER1Q8NEC5 780 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 RFWD2Q8NHY2 731 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 ACTRT2Q8TDY3 377 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 GAL3ST4Q96RP7 486 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 LMF1Q96S06 567 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 OR10A5Q9H207 317 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 NPHS2Q9NP85 383 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 FGFR1OP2Q9NVK5 253 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 AIG1Q9NVV5 245 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 LUZP4Q9P127 313 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 BCAP29Q9UHQ4 241 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 DCTN4Q9UJW0 460 aa15.31■□□□□ 0.04
SCLT1-205ENST00000503401 C9JVG2 144 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 ANKRD28O15084 1053 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 TBX19O60806 448 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 TGDSO95455 350 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 CBX7O95931 251 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 GYS2P54840 703 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 MLF1P58340 268 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 HSPB3Q12988 150 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 CPTPQ5TA50 214 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 ZNF468Q5VIY5 522 aaPredicted RBP15.3■□□□□ 0.04
SCLT1-205ENST00000503401 TMEM107Q6UX40 140 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 SPATA19Q7Z5L4 167 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 ZADH2Q8N4Q0 377 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 ZNF615Q8N8J6 731 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 OR7G2Q8NG99 324 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 OR52R1Q8NGF1 315 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 CEP70Q8NHQ1 597 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 CTHRC1Q96CG8 243 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 MTERF3Q96E29 417 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 MAGED4Q96JG8 741 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 TEX37Q96LM6 180 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 DPY30Q9C005 99 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 ZNF639Q9UID6 485 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 DTX4Q9Y2E6 619 aa15.3■□□□□ 0.04
SCLT1-205ENST00000503401 DYTNA2CJ06 578 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 E9PBE3 544 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 POLR3GO15318 223 aaPredicted RBP15.29■□□□□ 0.04
SCLT1-205ENST00000503401 DPM1O60762 260 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 ITGA10O75578 1167 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 OR2J2O76002 312 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 VIMP08670 466 aaKnown RBP15.29■□□□□ 0.04
SCLT1-205ENST00000503401 MC3RP41968 323 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 UFM1P61960 85 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 PGS1Q32NB8 556 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 IGFL3Q6UXB1 125 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 ACAD11Q709F0 780 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 SLC29A4Q7RTT9 530 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 TEX19Q8NA77 164 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 C16orf52Q8NHV5 167 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 ZNF675Q8TD23 568 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 TM9SF4Q92544 642 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 ZNF764Q96H86 408 aaPredicted RBP15.29■□□□□ 0.04
SCLT1-205ENST00000503401 TCF7L2Q9NQB0 619 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 MYOTQ9UBF9 498 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 GPR45Q9Y5Y3 372 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 EML6Q6ZMW3 1958 aa15.29■□□□□ 0.04
SCLT1-205ENST00000503401 ZNF354AO60765 605 aaPredicted RBP15.28■□□□□ 0.04
SCLT1-205ENST00000503401 C1QL1O75973 258 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 RPL3P39023 403 aaKnown RBP15.28■□□□□ 0.04
SCLT1-205ENST00000503401 MANFP55145 182 aaKnown RBP15.28■□□□□ 0.04
SCLT1-205ENST00000503401 EBPQ15125 230 aaKnown RBP15.28■□□□□ 0.04
SCLT1-205ENST00000503401 OR7G1Q8NGA0 311 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 OR8K3Q8NH51 312 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 COQ8BQ96D53 544 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 WWTR1Q9GZV5 400 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 CCDC134Q9H6E4 229 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCLT1-205ENST00000503401 A0A0G2JND7 137 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 EIF4E1BA6NMX2 242 aaKnown RBP15.28■□□□□ 0.04
SCLT1-205ENST00000503401 FCHO1O14526 889 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 UBDO15205 165 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 IL12AP29459 219 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 GPC1P35052 558 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 CD96P40200 585 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 FRKP42685 505 aaPredicted RBP15.28■□□□□ 0.04
SCLT1-205ENST00000503401 CDK9P50750 372 aaKnown RBP15.28■□□□□ 0.04
SCLT1-205ENST00000503401 C21orf58P58505 322 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 OC90Q02509 493 aaPredicted RBP15.28■□□□□ 0.04
SCLT1-205ENST00000503401 TUBA3CQ13748 450 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 RPS6KA2Q15349 733 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 NNATQ16517 81 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 SLC6A19Q695T7 634 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 OR4F3Q6IEY1 312 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms