RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 TRIM45Q9H8W5 580 aaPredicted RBP23.3■■□□□ 1.32
LSM6-202ENST00000502781 ABI3Q9P2A4 366 aa23.3■■□□□ 1.32
LSM6-202ENST00000502781 B3GNT3Q9Y2A9 372 aa23.3■■□□□ 1.32
LSM6-202ENST00000502781 GOLGA8QA0A0J9YX86 632 aa23.29■■□□□ 1.32
LSM6-202ENST00000502781 GOLGA8OA6NCC3 632 aa23.29■■□□□ 1.32
LSM6-202ENST00000502781 OR5H15A6NDH6 313 aa23.29■■□□□ 1.32
LSM6-202ENST00000502781 GOLGA8NF8WBI6 632 aa23.29■■□□□ 1.32
LSM6-202ENST00000502781 ANKRD28O15084 1053 aa23.29■■□□□ 1.32
LSM6-202ENST00000502781 CBX7O95931 251 aa23.29■■□□□ 1.32
LSM6-202ENST00000502781 ALDOCP09972 364 aaKnown RBP23.29■■□□□ 1.32
LSM6-202ENST00000502781 NTSP30990 170 aa23.29■■□□□ 1.32
LSM6-202ENST00000502781 HPCAL1P37235 193 aa23.29■■□□□ 1.32
LSM6-202ENST00000502781 TNFSF10P50591 281 aa23.29■■□□□ 1.32
LSM6-202ENST00000502781 EBPQ15125 230 aaKnown RBP23.29■■□□□ 1.32
LSM6-202ENST00000502781 C6orf163Q5TEZ5 329 aa23.29■■□□□ 1.32
LSM6-202ENST00000502781 FAM9CQ8IZT9 166 aa23.29■■□□□ 1.32
LSM6-202ENST00000502781 KRTCAP2Q8N6L1 136 aa23.29■■□□□ 1.32
LSM6-202ENST00000502781 OR10A5Q9H207 317 aa23.29■■□□□ 1.32
LSM6-202ENST00000502781 GLIPR2Q9H4G4 154 aa23.29■■□□□ 1.32
LSM6-202ENST00000502781 SH3BP4Q9P0V3 963 aa23.29■■□□□ 1.32
LSM6-202ENST00000502781 EIF4E1BA6NMX2 242 aaKnown RBP23.28■■□□□ 1.32
LSM6-202ENST00000502781 PDPK1O15530 556 aa23.28■■□□□ 1.32
LSM6-202ENST00000502781 PLOD3O60568 738 aa23.28■■□□□ 1.32
LSM6-202ENST00000502781 ITGA10O75578 1167 aa23.28■■□□□ 1.32
LSM6-202ENST00000502781 SLITRK5O94991 958 aa23.28■■□□□ 1.32
LSM6-202ENST00000502781 PCSK2P16519 638 aa23.28■■□□□ 1.32
LSM6-202ENST00000502781 ARG2P78540 354 aa23.28■■□□□ 1.32
LSM6-202ENST00000502781 MRPS35P82673 323 aaKnown RBP23.28■■□□□ 1.32
LSM6-202ENST00000502781 DUSP8Q13202 625 aa23.28■■□□□ 1.32
LSM6-202ENST00000502781 TUBA3CQ13748 450 aa23.28■■□□□ 1.32
LSM6-202ENST00000502781 TUBA3EQ6PEY2 450 aa23.28■■□□□ 1.32
LSM6-202ENST00000502781 SPATA19Q7Z5L4 167 aa23.28■■□□□ 1.32
LSM6-202ENST00000502781 CAMKMTQ7Z624 323 aa23.28■■□□□ 1.32
LSM6-202ENST00000502781 ZNF441Q8N8Z8 693 aa23.28■■□□□ 1.32
LSM6-202ENST00000502781 CATSPER1Q8NEC5 780 aa23.28■■□□□ 1.32
LSM6-202ENST00000502781 COQ8BQ96D53 544 aa23.28■■□□□ 1.32
LSM6-202ENST00000502781 MFRPQ9BY79 579 aa23.28■■□□□ 1.32
LSM6-202ENST00000502781 LIN28AQ9H9Z2 209 aaKnown RBP23.28■■□□□ 1.32
LSM6-202ENST00000502781 ACSS1Q9NUB1 689 aaPredicted RBP23.28■■□□□ 1.32
LSM6-202ENST00000502781 YARS2Q9Y2Z4 477 aaKnown RBP23.28■■□□□ 1.32
LSM6-202ENST00000502781 B8ZZF3 427 aa23.27■■□□□ 1.32
LSM6-202ENST00000502781 FCHO1O14526 889 aa23.27■■□□□ 1.32
LSM6-202ENST00000502781 EDF1O60869 148 aaKnown RBP23.27■■□□□ 1.32
LSM6-202ENST00000502781 SORBS2O94875 1100 aaKnown RBP23.27■■□□□ 1.32
LSM6-202ENST00000502781 IFI6P09912 130 aa23.27■■□□□ 1.32
LSM6-202ENST00000502781 DDX5P17844 614 aaKnown RBP23.27■■□□□ 1.32
LSM6-202ENST00000502781 CD96P40200 585 aa23.27■■□□□ 1.32
LSM6-202ENST00000502781 NCBP2P52298 156 aaKnown RBP eCLIP23.27■■□□□ 1.32
LSM6-202ENST00000502781 TLR1Q15399 786 aa23.27■■□□□ 1.32
LSM6-202ENST00000502781 PLEKHN1Q494U1 663 aaPredicted RBP23.27■■□□□ 1.32
LSM6-202ENST00000502781 FHL5Q5TD97 284 aa23.27■■□□□ 1.32
LSM6-202ENST00000502781 ZNF468Q5VIY5 522 aaPredicted RBP23.27■■□□□ 1.32
LSM6-202ENST00000502781 C16orf47Q6ZP98 133 aaPredicted RBP23.27■■□□□ 1.32
LSM6-202ENST00000502781 Q8NA96 180 aa23.27■■□□□ 1.32
LSM6-202ENST00000502781 SIMC1Q8NDZ2 872 aa23.27■■□□□ 1.32
LSM6-202ENST00000502781 OR7A2PQ8NGA2 310 aa23.27■■□□□ 1.32
LSM6-202ENST00000502781 CEP70Q8NHQ1 597 aa23.27■■□□□ 1.32
LSM6-202ENST00000502781 NUDT8Q8WV74 236 aa23.27■■□□□ 1.32
LSM6-202ENST00000502781 CIDECQ96AQ7 238 aaPredicted RBP23.27■■□□□ 1.32
LSM6-202ENST00000502781 OR52B2Q96RD2 323 aa23.27■■□□□ 1.32
LSM6-202ENST00000502781 WWTR1Q9GZV5 400 aa23.27■■□□□ 1.32
LSM6-202ENST00000502781 AIG1Q9NVV5 245 aa23.27■■□□□ 1.32
LSM6-202ENST00000502781 MAPRE3Q9UPY8 281 aa23.27■■□□□ 1.32
LSM6-202ENST00000502781 A0A087WV62 115 aa23.27■■□□□ 1.31
LSM6-202ENST00000502781 PLOD2O00469 737 aa23.27■■□□□ 1.31
LSM6-202ENST00000502781 SUV39H1O43463 412 aa23.27■■□□□ 1.31
LSM6-202ENST00000502781 OR2J2O76002 312 aa23.27■■□□□ 1.31
LSM6-202ENST00000502781 F10P00742 488 aa23.27■■□□□ 1.31
LSM6-202ENST00000502781 LAMP1P11279 417 aa23.27■■□□□ 1.31
LSM6-202ENST00000502781 EXOSC7Q15024 291 aaKnown RBP23.27■■□□□ 1.31
LSM6-202ENST00000502781 SLC29A4Q7RTT9 530 aa23.27■■□□□ 1.31
LSM6-202ENST00000502781 OR7G2Q8NG99 324 aa23.27■■□□□ 1.31
LSM6-202ENST00000502781 C16orf52Q8NHV5 167 aa23.27■■□□□ 1.31
LSM6-202ENST00000502781 KAT2AQ92830 837 aa23.27■■□□□ 1.31
LSM6-202ENST00000502781 ZBED6CLQ96FA7 236 aaPredicted RBP23.27■■□□□ 1.31
LSM6-202ENST00000502781 RASL10BQ96S79 203 aa23.27■■□□□ 1.31
LSM6-202ENST00000502781 UTP23Q9BRU9 249 aaKnown RBP23.27■■□□□ 1.31
LSM6-202ENST00000502781 CCDC134Q9H6E4 229 aa23.27■■□□□ 1.31
LSM6-202ENST00000502781 RYDENQ9NUL5 291 aaKnown RBP23.27■■□□□ 1.31
LSM6-202ENST00000502781 TCP11X1B4DZS4 312 aa23.26■■□□□ 1.31
LSM6-202ENST00000502781 ZNF354AO60765 605 aaPredicted RBP23.26■■□□□ 1.31
LSM6-202ENST00000502781 HLCSP50747 726 aa23.26■■□□□ 1.31
LSM6-202ENST00000502781 MLC1Q15049 377 aa23.26■■□□□ 1.31
LSM6-202ENST00000502781 LSM12Q3MHD2 195 aaKnown RBP23.26■■□□□ 1.31
LSM6-202ENST00000502781 PIGGQ5H8A4 983 aa23.26■■□□□ 1.31
LSM6-202ENST00000502781 CPTPQ5TA50 214 aa23.26■■□□□ 1.31
LSM6-202ENST00000502781 ZNF227Q86WZ6 799 aa23.26■■□□□ 1.31
LSM6-202ENST00000502781 NATD1Q8N6N6 113 aa23.26■■□□□ 1.31
LSM6-202ENST00000502781 MDS2Q8NDY4 140 aa23.26■■□□□ 1.31
LSM6-202ENST00000502781 C17orf47Q8NEP4 570 aa23.26■■□□□ 1.31
LSM6-202ENST00000502781 ADIPOR1Q96A54 375 aa23.26■■□□□ 1.31
LSM6-202ENST00000502781 PRPF18Q99633 342 aaKnown RBP23.26■■□□□ 1.31
LSM6-202ENST00000502781 CFL2Q9Y281 166 aa23.26■■□□□ 1.31
LSM6-202ENST00000502781 DTX4Q9Y2E6 619 aa23.26■■□□□ 1.31
LSM6-202ENST00000502781 GPR45Q9Y5Y3 372 aa23.26■■□□□ 1.31
LSM6-202ENST00000502781 TRAV17A0A0B4J275 112 aa23.25■■□□□ 1.31
LSM6-202ENST00000502781 WWP2O00308 870 aa23.25■■□□□ 1.31
LSM6-202ENST00000502781 PRAMEF2O60811 474 aa23.25■■□□□ 1.31
LSM6-202ENST00000502781 DIAPH2O60879 1101 aa23.25■■□□□ 1.31
LSM6-202ENST00000502781 BCAS2O75934 225 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms