RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 A0A1W2PRQ8 180 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 CACNB4O00305 520 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-204ENST00000501271 HAT1O14929 419 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 PGRMC2O15173 223 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 PRKYO43930 277 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 ERAL1O75616 437 aaKnown RBP9.3□□□□□ -0.92
CLIP1-204ENST00000501271 SLITRK5O94991 958 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 KAT7O95251 611 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 DRD2P14416 443 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 SPNP16150 400 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 MMP11P24347 488 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 PPP2R1BP30154 601 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 PKLRP30613 574 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 TRIM23P36406 574 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 DMPKQ09013 629 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 TIMM50Q3ZCQ8 353 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 MFSD4BQ5TF39 518 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 PAQR6Q6TCH4 344 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 VITQ6UXI7 678 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 ZER1Q7Z7L7 766 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 POC5Q8NA72 575 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 OR6T1Q8NGN1 323 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 OR8J1Q8NGP2 316 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 SUN3Q8TAQ9 357 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 HPS1Q92902 700 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 CNRIP1Q96F85 164 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-204ENST00000501271 TRMT61AQ96FX7 289 aaKnown RBP9.3□□□□□ -0.92
CLIP1-204ENST00000501271 TMEM80Q96HE8 168 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 TRNT1Q96Q11 434 aaKnown RBP9.3□□□□□ -0.92
CLIP1-204ENST00000501271 GPA33Q99795 319 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 KCNS3Q9BQ31 491 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 TSSK6Q9BXA6 273 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 QRSL1Q9H0R6 528 aaKnown RBP9.3□□□□□ -0.92
CLIP1-204ENST00000501271 CPNE5Q9HCH3 593 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 EHD3Q9NZN3 535 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 CFL2Q9Y281 166 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 UGT2A1Q9Y4X1 527 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 PEX16Q9Y5Y5 336 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 STON1Q9Y6Q2 735 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 SCN3AQ9NY46 2000 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 A0A1W2PR48 441 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 PRR23AA6NEV1 266 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 SCAMP1O15126 338 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 ERI3O43414 337 aaKnown RBP9.3□□□□□ -0.92
CLIP1-204ENST00000501271 KDM1AO60341 852 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 KCNK2O95069 426 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 HBQ1P09105 142 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 ALOX12P18054 663 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 MAGP20916 626 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 NTSP30990 170 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 SOX6P35712 828 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 KHKP50053 298 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 SFSWAPQ12872 951 aaKnown RBP9.3□□□□□ -0.92
CLIP1-204ENST00000501271 SLAMF1Q13291 335 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 LASP1Q14847 261 aaKnown RBP9.3□□□□□ -0.92
CLIP1-204ENST00000501271 ZIC1Q15915 447 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 UAP1L1Q3KQV9 507 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 MEDAGQ5VYS4 303 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 IQCHQ86VS3 1027 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 MEX3DQ86XN8 651 aaKnown RBP9.3□□□□□ -0.92
CLIP1-204ENST00000501271 KRT73Q86Y46 540 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 HDDC3Q8N4P3 179 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 RAB42Q8N4Z0 105 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 FBXL6Q8N531 539 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 MORN4Q8NDC4 146 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 OR4K5Q8NGD3 323 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 MS4A6EQ96DS6 147 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 BBS4Q96RK4 519 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 CNPPD1Q9BV87 410 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 FNDC11Q9BVV2 318 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 FAM117AQ9C073 453 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 ZSCAN32Q9NX65 697 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 TVP23BQ9NYZ1 205 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 ATG4BQ9Y4P1 393 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 ASB4Q9Y574 426 aa9.3□□□□□ -0.92
CLIP1-204ENST00000501271 SZT2Q5T011 3432 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 GPR89AB7ZAQ6 455 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 WWP2O00308 870 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 CTDSP2O14595 271 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 MED26O95402 600 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 HMGN2P05204 90 aaKnown RBP9.29□□□□□ -0.92
CLIP1-204ENST00000501271 GPR89BP0CG08 455 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 C8orf89P0DMQ9 161 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 HIST1H1TP22492 207 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-204ENST00000501271 PEBP1P30086 187 aaKnown RBP9.29□□□□□ -0.92
CLIP1-204ENST00000501271 ETV6P41212 452 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 MAN2A2P49641 1150 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 SMIM11AP58511 58 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 RUNX3Q13761 415 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 SLC9A5Q14940 896 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 SPHARQ15513 63 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 C18orf63Q68DL7 685 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 PSRC1Q6PGN9 363 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-204ENST00000501271 TMEM107Q6UX40 140 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 CCDC190Q86UF4 302 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 OR52E1Q8NGJ3 308 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 OR2L8Q8NGY9 312 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 BBS10Q8TAM1 723 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 HERVK_113Q902F9 699 aa9.29□□□□□ -0.92
CLIP1-204ENST00000501271 C16orf58Q96GQ5 468 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms