RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 DHDDSQ86SQ9 333 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 ZNF321PQ8N8H1 164 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 B3GNT7Q8NFL0 401 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 NCLNQ969V3 563 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 NACC2Q96BF6 587 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 RCN3Q96D15 328 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 FBXL20Q96IG2 436 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 CCDC115Q96NT0 180 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 IP6K3Q96PC2 410 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 GAL3ST4Q96RP7 486 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 CXorf36Q9H7Y0 433 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 CPNE5Q9HCH3 593 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 EQTNQ9NQ60 294 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 SIRT3Q9NTG7 399 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-227ENST00000498056 ZCCHC3Q9NUD5 404 aaKnown RBP12.65□□□□□ -0.38
CPNE1-227ENST00000498056 TAS2R9Q9NYW1 312 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 BTNL2Q9UIR0 455 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 VPS4AQ9UN37 437 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 POLHQ9Y253 713 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 NDUFAF1Q9Y375 327 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 PTPRQQ9UMZ3 2332 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 LOC100653049A0A140TA62 436 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 A0A1W2PP18 115 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 PRAMEF2O60811 474 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 SCN2BO60939 215 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 COQ9O75208 318 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 KRT34O76011 436 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 SLITRK5O94991 958 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 DDAH2O95865 285 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 CELA2AP08217 269 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 COX4I1P13073 169 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 ITPKBP27987 946 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 GALNSP34059 522 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 CHI3L1P36222 383 aaPredicted RBP12.64□□□□□ -0.39
CPNE1-227ENST00000498056 CPA2P48052 419 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 PRR5P85299 388 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 LRRC74AQ0VAA2 488 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 TP53BP2Q13625 1128 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 NFYCQ13952 458 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 MLC1Q15049 377 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 EXT1Q16394 746 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 TRMT12Q53H54 448 aaKnown RBP12.64□□□□□ -0.39
CPNE1-227ENST00000498056 CLEC4FQ8N1N0 589 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 FITM2Q8N6M3 262 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 AMER2Q8N7J2 671 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 MORN4Q8NDC4 146 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 OR52R1Q8NGF1 315 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 FBXO30Q8TB52 745 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 THAP4Q8WY91 577 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 VMP1Q96GC9 406 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 MS4A4EQ96PG1 132 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 NPAS2Q99743 824 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 SLC35A5Q9BS91 424 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 IL1RL2Q9HB29 575 aa12.64□□□□□ -0.39
CPNE1-227ENST00000498056 EML6Q6ZMW3 1958 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 ANKRD11Q6UB99 2663 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-227ENST00000498056 A0A1W2PQ72 361 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 CAPN14A8MX76 684 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 KCNH1O95259 989 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 CBX6O95503 412 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 CBX7O95931 251 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 NUDT2P50583 147 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 PRKAG1P54619 331 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 RRADP55042 308 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 UCNP55089 124 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 MAP4K2Q12851 820 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 DEFB109BQ30KR1 87 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 GTDC1Q4AE62 458 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 PAGE3Q5JUK9 113 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 FAM91A1Q658Y4 838 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 PLAG1Q6DJT9 500 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 TMEM64Q6YI46 380 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 TRPM8Q7Z2W7 1104 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 RETREG3Q86VR2 466 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 KIF2BQ8N4N8 673 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 TRIML2Q8N7C3 387 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 CLEC1AQ8NC01 280 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 SIMC1Q8NDZ2 872 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 NFAM1Q8NET5 270 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-227ENST00000498056 OR56A1Q8NGH5 318 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 OR1N1Q8NGS0 311 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 RP9Q8TA86 221 aaKnown RBP12.63□□□□□ -0.39
CPNE1-227ENST00000498056 SFXN5Q8TD22 340 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 ZNF721Q8TF20 911 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 TSPEARQ8WU66 669 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 JADE3Q92613 823 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 GTF2H4Q92759 462 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 CMTM5Q96DZ9 223 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 ELP4Q96EB1 424 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 FAM120BQ96EK7 910 aaKnown RBP12.63□□□□□ -0.39
CPNE1-227ENST00000498056 SLC35G5Q96KT7 338 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 FER1L6-AS2Q96M78 137 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 NUDT9Q9BW91 350 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 OR10A5Q9H207 317 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 C3orf14Q9HBI5 128 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 SLC52A3Q9NQ40 469 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 SERHLQ9NQF3 203 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 ARL8BQ9NVJ2 186 aa12.63□□□□□ -0.39
CPNE1-227ENST00000498056 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.63□□□□□ -0.39
CPNE1-227ENST00000498056 PTGFRNQ9P2B2 879 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms