RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 HECTD2Q5U5R9 776 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 CAPN13Q6MZZ7 669 aaPredicted RBP6.94□□□□□ -1.3
VPS45-210ENST00000497638 ABHD13Q7L211 337 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 LDB1Q86U70 411 aaPredicted RBP6.94□□□□□ -1.3
VPS45-210ENST00000497638 LIX1Q8N485 282 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 ZNF740Q8NDX6 193 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 PPHLN1Q8NEY8 458 aaKnown RBP6.94□□□□□ -1.3
VPS45-210ENST00000497638 OR52K1Q8NGK4 314 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 PPP1R14CQ8TAE6 165 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 NEIL3Q8TAT5 605 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 NCLNQ969V3 563 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 KIAA1191Q96A73 305 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 CCDC138Q96M89 665 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 RASL10BQ96S79 203 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 BPIFA3Q9BQP9 254 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 PCBD2Q9H0N5 130 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 ACKR4Q9NPB9 350 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 CCDC177Q9NQR7 707 aaPredicted RBP6.94□□□□□ -1.3
VPS45-210ENST00000497638 ABCF3Q9NUQ8 709 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 TRMT1Q9NXH9 659 aaKnown RBP6.94□□□□□ -1.3
VPS45-210ENST00000497638 QPCTLQ9NXS2 382 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 TUBA8Q9NY65 449 aaPredicted RBP6.94□□□□□ -1.3
VPS45-210ENST00000497638 GPRC5BQ9NZH0 403 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 MARCH4Q9P2E8 410 aaPredicted RBP6.94□□□□□ -1.3
VPS45-210ENST00000497638 ATG4BQ9Y4P1 393 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 MMACHCQ9Y4U1 282 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 CUBNO60494 3623 aa6.94□□□□□ -1.3
VPS45-210ENST00000497638 KIAA1549Q9HCM3 1950 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 SYNDIG1LA6NDD5 238 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 CD8B2A6NJW9 211 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 CD3EAPO15446 510 aaKnown RBP6.93□□□□□ -1.3
VPS45-210ENST00000497638 NDUFS4O43181 175 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 AKR1B10O60218 316 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 TMCC2O75069 709 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 ERN1O75460 977 aaKnown RBP6.93□□□□□ -1.3
VPS45-210ENST00000497638 METTL18O95568 372 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 SERPINC1P01008 464 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 VSIG10L2P0DP72 767 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 PAX1P15863 534 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 CTSSP25774 331 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 MARCKSL1P49006 195 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 GPR143P51810 404 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 ADARP55265 1226 aaKnown RBP6.93□□□□□ -1.3
VPS45-210ENST00000497638 OLR1P78380 273 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 TBL3Q12788 808 aaKnown RBP6.93□□□□□ -1.3
VPS45-210ENST00000497638 RPS6KA1Q15418 735 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 KLHL38Q2WGJ6 581 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 ZNF750Q32MQ0 723 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 CHRFAM7AQ494W8 412 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 XKR6Q5GH73 641 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 CTSL3PQ5NE16 218 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 NSUN5P2Q63ZY6 315 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 OPN5Q6U736 354 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.93□□□□□ -1.3
VPS45-210ENST00000497638 PM20D2Q8IYS1 436 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 MFSD9Q8NBP5 474 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 PDLIM2Q96JY6 352 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 CAPZA3Q96KX2 299 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 ZNF778Q96MU6 729 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 RBM24Q9BX46 236 aaKnown RBP6.93□□□□□ -1.3
VPS45-210ENST00000497638 AMBRA1Q9C0C7 1298 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 UBTD1Q9HAC8 227 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 NECTIN3Q9NQS3 549 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 NDRG3Q9UGV2 375 aa6.93□□□□□ -1.3
VPS45-210ENST00000497638 BOKQ9UMX3 212 aaPredicted RBP6.93□□□□□ -1.3
VPS45-210ENST00000497638 FREM3P0C091 2139 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 RAI1Q7Z5J4 1906 aaPredicted RBP6.92□□□□□ -1.3
VPS45-210ENST00000497638 C15orf38-AP3S2A0A0A6YYH1 394 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 MBD3L3A6NE82 208 aaPredicted RBP6.92□□□□□ -1.3
VPS45-210ENST00000497638 GOLGA6L6A8MZA4 724 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 WWP2O00308 870 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 PFDN6O15212 129 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 CTIFO43310 598 aaKnown RBP6.92□□□□□ -1.3
VPS45-210ENST00000497638 PRKNO60260 465 aaPredicted RBP6.92□□□□□ -1.3
VPS45-210ENST00000497638 LCMT2O60294 686 aaKnown RBP6.92□□□□□ -1.3
VPS45-210ENST00000497638 CEP104O60308 925 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 NIPSNAP2O75323 286 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 SYF2O95926 243 aaKnown RBP6.92□□□□□ -1.3
VPS45-210ENST00000497638 GYPCP04921 128 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 FAM157CP0CG43 387 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 CCL3P10147 92 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 KRT4P19013 534 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 IMPA1P29218 277 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 PTPN7P35236 360 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 SKIV2L2P42285 1042 aaKnown RBP6.92□□□□□ -1.3
VPS45-210ENST00000497638 CPA2P48052 419 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 MECP2P51608 486 aaKnown RBP6.92□□□□□ -1.3
VPS45-210ENST00000497638 HADHBP55084 474 aaKnown RBP6.92□□□□□ -1.3
VPS45-210ENST00000497638 WNT3P56703 355 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 TBPL1P62380 186 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 RGS1Q08116 209 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 CRYZQ08257 329 aaKnown RBP6.92□□□□□ -1.3
VPS45-210ENST00000497638 KCNJ11Q14654 390 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 PHKG1Q16816 387 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 TTLL9Q3SXZ7 439 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 ACSBG2Q5FVE4 666 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 RNF187Q5TA31 235 aaPredicted RBP6.92□□□□□ -1.3
VPS45-210ENST00000497638 HSDL2Q6YN16 418 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 PPP1R21Q6ZMI0 780 aa6.92□□□□□ -1.3
VPS45-210ENST00000497638 C17orf64Q86WR6 236 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms