RNA–Protein interactions for RNA: ENST00000496805.5

PEF1-208, Transcript of penta-EF-hand domain containing 1, human

TSL 5

Gene PEF1, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PEF1-208	ENST00000496805	ZNF385B	Q569K4	471 aa		12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	SAMD4B	Q5PRF9	694 aa	Known RBP	12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	SLC48A1	Q6P1K1	146 aa		12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	DLEU7	Q6UYE1	221 aa		12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	ZNF517	Q6ZMY9	492 aa	Predicted RBP	12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	RIPOR1	Q6ZS17	1223 aa		12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	PRSS41	Q7RTY9	318 aa		12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	ANKRD46	Q86W74	232 aa		12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	SAMD14	Q8IZD0	417 aa	Predicted RBP	12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	OR8J3	Q8NGG0	315 aa		12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	NUDT8	Q8WV74	236 aa		12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	UTP4	Q969X6	686 aa	Known RBP	12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	ZNF501	Q96CX3	271 aa	Predicted RBP	12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	ZBED6CL	Q96FA7	236 aa	Predicted RBP	12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	PANX1	Q96RD7	426 aa		12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	CGREF1	Q99674	301 aa		12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	MAPKAP1	Q9BPZ7	522 aa		12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	SLC39A3	Q9BRY0	314 aa		12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	THTPA	Q9BU02	230 aa		12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	IL1RL2	Q9HB29	575 aa		12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	FGF21	Q9NSA1	209 aa		12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	ACSS1	Q9NUB1	689 aa	Predicted RBP	12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	GIMAP4	Q9NUV9	329 aa		12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	FBXW2	Q9UKT8	454 aa		12.09	□□□□□ -0.47
PEF1-208	ENST00000496805	DAPP1	Q9UN19	280 aa		12.09	□□□□□ -0.47
PEF1-208	ENST00000496805		A0A1W2PR48	441 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	ZNF860	A6NHJ4	632 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805		H0YIG0	161 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	CREG1	O75629	220 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	CIB2	O75838	187 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	B3GALT4	O96024	378 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	CTSB	P07858	339 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	ZCCHC18	P0CG32	403 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	RNH1	P13489	461 aa	Known RBP	12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	CPN2	P22792	545 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	SLC6A2	P23975	617 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	FRK	P42685	505 aa	Predicted RBP	12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	CCL11	P51671	97 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	ARSF	P54793	590 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	RAB38	P57729	211 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	RPS18	P62269	152 aa	Known RBP	12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	PHC1	P78364	1004 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	CAPRIN1	Q14444	709 aa	Known RBP	12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	SCUBE1	Q8IWY4	988 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	CA13	Q8N1Q1	262 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	TRIML2	Q8N7C3	387 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	OR9A4	Q8NGU2	314 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	OR1L3	Q8NH93	324 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	ZFP28	Q8NHY6	868 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	GBP5	Q96PP8	586 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	SH3GL1	Q99961	368 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	NDC1	Q9BTX1	674 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	ULBP3	Q9BZM4	244 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	PAIP1	Q9H074	479 aa	Known RBP	12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	SLC35C2	Q9NQQ7	365 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	FBXO8	Q9NRD0	319 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	CUTC	Q9NTM9	273 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	ADA2	Q9NZK5	511 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	KCMF1	Q9P0J7	381 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	TMEM181	Q9P2C4	612 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	SERTAD3	Q9UJW9	196 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	UTS2R	Q9UKP6	389 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	CDC14A	Q9UNH5	594 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	MRPS33	Q9Y291	106 aa	Known RBP	12.08	□□□□□ -0.48
PEF1-208	ENST00000496805	CACNA1C	Q13936	2221 aa		12.08	□□□□□ -0.48
PEF1-208	ENST00000496805		A0A0A6YYC8	382 aa	Predicted RBP	12.07	□□□□□ -0.48
PEF1-208	ENST00000496805		H0YHG0	523 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805		I3L1I5	382 aa	Predicted RBP	12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	SGK494	L7N484	410 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	DSCR3	O14972	297 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	LRRTM2	O43300	516 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	FOXS1	O43638	330 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	PPIB	P23284	216 aa	Known RBP	12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	PTPN6	P29350	595 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	PPP2R1B	P30154	601 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	KRTAP10-9	P60411	292 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	SNRPN	P63162	240 aa	Known RBP	12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	DNASE1L3	Q13609	305 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	IL10RA	Q13651	578 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	RUNX2	Q13950	521 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	DSG2	Q14126	1118 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	MLC1	Q15049	377 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	MPEG1	Q2M385	716 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	PIGG	Q5H8A4	983 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	PGM2L1	Q6PCE3	622 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	C6orf15	Q6UXA7	325 aa	Predicted RBP	12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	BPHL	Q86WA6	291 aa	Predicted RBP	12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	CLECL1	Q8IZS7	167 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	CISD2	Q8N5K1	135 aa	Known RBP	12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	OR4A15	Q8NGL6	344 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	GOT1L1	Q8NHS2	421 aa	Predicted RBP	12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	OR5P2	Q8WZ92	322 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	PNPLA2	Q96AD5	504 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	TMEM125	Q96AQ2	219 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	CIDEC	Q96AQ7	238 aa	Predicted RBP	12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	EXOSC8	Q96B26	276 aa	Known RBP	12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	ANKRD27	Q96NW4	1050 aa		12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	CPPED1	Q9BRF8	314 aa	Predicted RBP	12.07	□□□□□ -0.48
PEF1-208	ENST00000496805	ZPBP	Q9BS86	351 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms