RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 OR4L1Q8NH43 312 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 OR56B4Q8NH76 319 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 SFT2D1Q8WV19 159 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 PIH1D2Q8WWB5 315 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 USP7Q93009 1102 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 C1GALT1C1Q96EU7 318 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 C11orf24Q96F05 449 aaPredicted RBP8.61□□□□□ -1.03
HPS4-217ENST00000496385 MNTQ99583 582 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 TREX2Q9BQ50 279 aaPredicted RBP8.61□□□□□ -1.03
HPS4-217ENST00000496385 TCEAL7Q9BRU2 100 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 APOL5Q9BWW9 433 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 CYSLTR2Q9NS75 346 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 CACNG4Q9UBN1 327 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 CLEC2DQ9UHP7 191 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 SNX11Q9Y5W9 270 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 XIRP2A4UGR9 3374 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 ABHD14A-ACY1A0A1B0GW23 586 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 G3V3Q6 166 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 LGALS8O00214 317 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 SULT1C2O00338 296 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 OR1I1O60431 355 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 CBX7O95931 251 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 NR2F6P10588 404 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 BCKDHAP12694 445 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 DRD2P14416 443 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 ZNF3P17036 446 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 NFYAP23511 347 aaPredicted RBP8.61□□□□□ -1.03
HPS4-217ENST00000496385 RBMS1P29558 406 aaKnown RBP8.61□□□□□ -1.03
HPS4-217ENST00000496385 CAPZA2P47755 286 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 RENBPP51606 427 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 IL2P60568 153 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 RPS7P62081 194 aaKnown RBP8.61□□□□□ -1.03
HPS4-217ENST00000496385 LRRC32Q14392 662 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 SMAD2Q15796 467 aaKnown RBP8.61□□□□□ -1.03
HPS4-217ENST00000496385 ZRANB3Q5FWF4 1079 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 RAET1GQ6H3X3 334 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 ATRAIDQ6UW56 229 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 IKBIPQ70UQ0 350 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 TMEM17Q86X19 198 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 STX12Q86Y82 276 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 SLC5A11Q8WWX8 675 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 KCTD12Q96CX2 325 aaKnown RBP8.61□□□□□ -1.03
HPS4-217ENST00000496385 TPD52L3Q96J77 140 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 ZFP42Q96MM3 310 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 CINPQ9BW66 212 aaPredicted RBP8.61□□□□□ -1.03
HPS4-217ENST00000496385 BCL2L14Q9BZR8 327 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 EVA1AQ9H8M9 152 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 SDHAF3Q9NRP4 125 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 DDIT4Q9NX09 232 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 TRPS1Q9UHF7 1281 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 FBXL2Q9UKC9 423 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 LRFN2Q9ULH4 789 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 CBLCQ9ULV8 474 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 SPATA2Q9UM82 520 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 COMMD10Q9Y6G5 202 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 COL6A3P12111 3177 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 TMEM129A0AVI4 362 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 CARNS1A5YM72 827 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 FAM74A7A6NL05 159 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 TLR4O00206 839 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 SOX1O00570 391 aaPredicted RBP8.6□□□□□ -1.03
HPS4-217ENST00000496385 SGCEO43556 437 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 ULK1O75385 1050 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 RP2O75695 350 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 AQP8O94778 261 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 RAB36O95755 333 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 SOD1P00441 154 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 CNR2P34972 360 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 PBX3P40426 434 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 VEGFCP49767 419 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 NR0B1P51843 470 aaKnown RBP8.6□□□□□ -1.03
HPS4-217ENST00000496385 WNT4P56705 351 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 VSX2P58304 361 aaPredicted RBP8.6□□□□□ -1.03
HPS4-217ENST00000496385 MTAPQ13126 283 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 TAF1AQ15573 450 aaPredicted RBP8.6□□□□□ -1.03
HPS4-217ENST00000496385 FAM74A3Q4VXF1 159 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 CRTC2Q53ET0 693 aaPredicted RBP8.6□□□□□ -1.03
HPS4-217ENST00000496385 TCTE1Q5JU00 501 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 AFMIDQ63HM1 303 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 SUSD1Q6UWL2 747 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 SLC24A5Q71RS6 500 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 LRRTM3Q86VH5 581 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 KRT78Q8N1N4 520 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 C12orf45Q8N5I9 185 aaPredicted RBP8.6□□□□□ -1.03
HPS4-217ENST00000496385 SPICQ8N5J4 248 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 OR8J1Q8NGP2 316 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 OR5M3Q8NGP4 307 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 ADAMTS19Q8TE59 1207 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 GANCQ8TET4 914 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 CDK15Q96Q40 435 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 OR4K3Q96R72 315 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 INPP5KQ9BT40 448 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 PTDSS2Q9BVG9 487 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 SARGQ9BW04 601 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 TKTL2Q9H0I9 626 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 SLC25A32Q9H2D1 315 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 PRO3102Q9H379 93 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 C8orf33Q9H7E9 229 aaPredicted RBP8.6□□□□□ -1.03
HPS4-217ENST00000496385 TMEM184CQ9NVA4 438 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 PCOLCE2Q9UKZ9 415 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms