RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ETS2P15036 469 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 ALOX12P18054 663 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 NELFEP18615 380 aaKnown RBP6.53□□□□□ -1.36
USP39-219ENST00000496047 CDH3P22223 829 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 PAX7P23759 505 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 CD27P26842 260 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 KRT20P35900 424 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 IFNGR2P38484 337 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 ALDH3B2P48448 385 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 MVDP53602 400 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 IST1P53990 364 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 PRKAG1P54619 331 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 CDC42P60953 191 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 RAB8AP61006 207 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 HNRNPKP61978 463 aaKnown RBP eCLIP6.53□□□□□ -1.36
USP39-219ENST00000496047 TEKQ02763 1124 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 SMAD2Q15796 467 aaKnown RBP6.53□□□□□ -1.36
USP39-219ENST00000496047 MICAQ29983 383 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 MPEG1Q2M385 716 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 C6orf141Q5SZD1 244 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 DCST1Q5T197 706 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 ISLR2Q6UXK2 745 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 ZNF793Q6ZN11 406 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 RNF44Q7L0R7 432 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 GALNT5Q7Z7M9 940 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 GALNT10Q86SR1 603 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 C10orf111Q8N326 155 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 HORMAD2Q8N7B1 307 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 C7orf57Q8NEG2 295 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 NUP43Q8NFH3 380 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 OR4K14Q8NGD5 310 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 BAHD1Q8TBE0 780 aaPredicted RBP6.53□□□□□ -1.36
USP39-219ENST00000496047 ADAMTS16Q8TE57 1224 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 ADAMTS15Q8TE58 950 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 ZFAND2BQ8WV99 257 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 XAGE5Q8WWM1 108 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 JPH3Q8WXH2 748 aaPredicted RBP6.53□□□□□ -1.36
USP39-219ENST00000496047 FCGR1BQ92637 280 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 TAMM41Q96BW9 452 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 CNDP2Q96KP4 475 aaKnown RBP6.53□□□□□ -1.36
USP39-219ENST00000496047 ZNF354BQ96LW1 612 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 OR2A14Q96R47 310 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 CITED4Q96RK1 184 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 MAPKAP1Q9BPZ7 522 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 PSD2Q9BQI7 771 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 IER2Q9BTL4 223 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 TEX12Q9BXU0 123 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 GABARAPL3Q9BY60 117 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 CCDC90BQ9GZT6 254 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 EPS8L2Q9H6S3 715 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 EVA1AQ9H8M9 152 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 POLR1BQ9H9Y6 1135 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 LMAN1LQ9HAT1 526 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 ANKHQ9HCJ1 492 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 LTB4R2Q9NPC1 389 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 PRDM7Q9NQW5 492 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 SIRT3Q9NTG7 399 aaPredicted RBP6.53□□□□□ -1.36
USP39-219ENST00000496047 HRASLS2Q9NWW9 162 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 IMPAD1Q9NX62 359 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 PTGFRNQ9P2B2 879 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 PNMA8BQ9ULN7 279 aaPredicted RBP6.53□□□□□ -1.36
USP39-219ENST00000496047 CA5BQ9Y2D0 317 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 SH3GLB1Q9Y371 365 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 ASB4Q9Y574 426 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 KLK4Q9Y5K2 254 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 LYVE1Q9Y5Y7 322 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 TRBV23OR9-2A0A075B6M9 112 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 IGHV1OR15-9A0A0B4J2B8 117 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 FAM86C2PA6NEL3 165 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 OR5K3A6NET4 321 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 LILRA5A6NI73 299 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 TRIM64CA6NLI5 447 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 PLOD2O00469 737 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 HMGN4O00479 90 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 PROM1O43490 865 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 COQ9O75208 318 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 DIRAS1O95057 198 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 CLIC3O95833 236 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 ADAP00813 363 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 IGHV4-34P06331 123 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 H1F0P07305 194 aaKnown RBP6.52□□□□□ -1.37
USP39-219ENST00000496047 OR12D1P0DN82 309 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 CHRNB1P11230 501 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 ELK4P28324 431 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 CD38P28907 300 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 XCR1P46094 333 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 DAPP51397 102 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 CASP9P55211 416 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 C21orf59P57076 290 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 RAB38P57729 211 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 RACK1P63244 317 aaKnown RBP6.52□□□□□ -1.37
USP39-219ENST00000496047 UBE2IP63279 158 aaKnown RBP6.52□□□□□ -1.37
USP39-219ENST00000496047 ROR2Q01974 943 aaKnown RBP6.52□□□□□ -1.37
USP39-219ENST00000496047 EEF1A2Q05639 463 aaKnown RBP6.52□□□□□ -1.37
USP39-219ENST00000496047 HYAL2Q12891 473 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 NPRL3Q12980 569 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 LASP1Q14847 261 aaKnown RBP6.52□□□□□ -1.37
USP39-219ENST00000496047 CEBPEQ15744 281 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 NEDD8Q15843 81 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 FGD3Q5JSP0 725 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms