RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 ERVK-11Q9UQG0 969 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 NTNG1Q9Y2I2 539 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 YARS2Q9Y2Z4 477 aaKnown RBP9.11□□□□□ -0.95
CALD1-223ENST00000496024 TMED5Q9Y3A6 229 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 NINQ8N4C6 2090 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 A8MVJ9 347 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 NPIPB8E9PQR5 432 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 ZNF354AO60765 605 aaPredicted RBP9.1□□□□□ -0.95
CALD1-223ENST00000496024 SNNO75324 88 aaPredicted RBP9.1□□□□□ -0.95
CALD1-223ENST00000496024 NME6O75414 186 aaPredicted RBP9.1□□□□□ -0.95
CALD1-223ENST00000496024 SLC25A12O75746 678 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 NEURL1O76050 574 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 SNUPNO95149 360 aaKnown RBP9.1□□□□□ -0.95
CALD1-223ENST00000496024 CLPSP04118 112 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 ATP1B1P05026 303 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 SP1P08047 785 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 EFNA1P20827 205 aaPredicted RBP9.1□□□□□ -0.95
CALD1-223ENST00000496024 MAPK1P28482 360 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 NTSP30990 170 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 NCBP2P52298 156 aaKnown RBP eCLIP9.1□□□□□ -0.95
CALD1-223ENST00000496024 MGAT2Q10469 447 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 FUT7Q11130 342 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 MAP4K2Q12851 820 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 EBPQ15125 230 aaKnown RBP9.1□□□□□ -0.95
CALD1-223ENST00000496024 NNATQ16517 81 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 PRICKLE4Q2TBC4 344 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 TRMT12Q53H54 448 aaKnown RBP9.1□□□□□ -0.95
CALD1-223ENST00000496024 HLA-DQA1Q5Y7H0 255 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 SLC25A25Q6KCM7 469 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 TMEM64Q6YI46 380 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 GALNTL5Q7Z4T8 443 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 HORMAD2Q8N7B1 307 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 ZNF615Q8N8J6 731 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 OR8K3Q8NH51 312 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 GRHL3Q8TE85 626 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 NUDT8Q8WV74 236 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 DYDC1Q8WWB3 177 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 ZNF75CPQ92670 426 aaPredicted RBP9.1□□□□□ -0.95
CALD1-223ENST00000496024 TMEM125Q96AQ2 219 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 MAGED4Q96JG8 741 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 FCRL1Q96LA6 429 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 WWTR1Q9GZV5 400 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 ACBD3Q9H3P7 528 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 REEP4Q9H6H4 257 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 AKTIPQ9H8T0 292 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 ANKRA2Q9H9E1 313 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 ZNF446Q9NWS9 450 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 HPF1Q9NWY4 346 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 EHD3Q9NZN3 535 aa9.1□□□□□ -0.95
CALD1-223ENST00000496024 EIF3LQ9Y262 564 aaKnown RBP9.1□□□□□ -0.95
CALD1-223ENST00000496024 FLNCQ14315 2725 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 GOLGA8QA0A0J9YX86 632 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 C2orf92A0A1B0GVN3 265 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 GOLGA8OA6NCC3 632 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 OR6C76A6NM76 312 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 MYO1GB0I1T2 1018 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 GOLGA8NF8WBI6 632 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 G3V3Y1 287 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 PDPK1O15530 556 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 RASAL1O95294 804 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 CBX7O95931 251 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 G6PDP11413 515 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 S1PR1P21453 382 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 MPIP34949 423 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 TRHRP34981 398 aaPredicted RBP9.09□□□□□ -0.95
CALD1-223ENST00000496024 HPCAL1P37235 193 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 ASMTP46597 345 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 NR0B1P51843 470 aaKnown RBP9.09□□□□□ -0.95
CALD1-223ENST00000496024 GPR85P60893 370 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 PPP2R2AP63151 447 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 FOXK1P85037 733 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 OCRLQ01968 901 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 DUSP8Q13202 625 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 PTGR1Q14914 329 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 ZNF385BQ569K4 471 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 PIGGQ5H8A4 983 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 FAM180AQ6UWF9 173 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 IKBIPQ70UQ0 350 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 ZNF551Q7Z340 670 aaPredicted RBP9.09□□□□□ -0.95
CALD1-223ENST00000496024 MDGA2Q7Z553 956 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.09□□□□□ -0.95
CALD1-223ENST00000496024 ZNF227Q86WZ6 799 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 WDR75Q8IWA0 830 aaKnown RBP9.09□□□□□ -0.95
CALD1-223ENST00000496024 PRR22Q8IZ63 422 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 SAMD14Q8IZD0 417 aaPredicted RBP9.09□□□□□ -0.95
CALD1-223ENST00000496024 FAM9CQ8IZT9 166 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 ARMC10Q8N2F6 343 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 TMEM178AQ8NBL3 297 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 OR7G1Q8NGA0 311 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 OR52R1Q8NGF1 315 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 OR5M3Q8NGP4 307 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 C16orf52Q8NHV5 167 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 NUBPLQ8TB37 319 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 RAB3IL1Q8TBN0 382 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 SLC22A8Q8TCC7 542 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 LRRC8CQ8TDW0 803 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 CIDECQ96AQ7 238 aaPredicted RBP9.09□□□□□ -0.95
CALD1-223ENST00000496024 MIB2Q96AX9 1013 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 PPCDCQ96CD2 204 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 TAAR6Q96RI8 345 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms