RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 FZD5Q13467 585 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 PLA1AQ53H76 456 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 PODNL1Q6PEZ8 512 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 TMPRSS11BQ86T26 416 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 NR2C2APQ86WQ0 139 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 GHDCQ8N2G8 530 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 ASZ1Q8WWH4 475 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 CREB3L1Q96BA8 519 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 HYLS1Q96M11 299 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 FAM8A1Q9UBU6 413 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 OR2AG2A6NM03 316 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 DVL2O14641 736 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 SLC30A4O14863 429 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 FABP7O15540 132 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 HRO43593 1189 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 SCO1O75880 301 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 TGFB1P01137 390 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 ACP2P11117 423 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 UQCRC2P22695 453 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 SLC6A1P30531 599 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 KCNJ5P48544 419 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 ZNF155Q12901 538 aaPredicted RBP14.53□□□□□ -0.08
SDF4-207ENST00000494748 PLD1Q13393 1074 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 IL18Q14116 193 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 LRRC32Q14392 662 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 KLHL22Q53GT1 634 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 USP45Q70EL2 814 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 LRRC56Q8IYG6 542 aaPredicted RBP14.53□□□□□ -0.08
SDF4-207ENST00000494748 DNAJA4Q8WW22 397 aaPredicted RBP14.53□□□□□ -0.08
SDF4-207ENST00000494748 SCAMP4Q969E2 229 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 AP2M1Q96CW1 435 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 NEURL3Q96EH8 262 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 TMEM169Q96HH4 297 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 LINC00597Q9H2U6 94 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 SLC28A3Q9HAS3 691 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 GLTPQ9NZD2 209 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 B4GALT6Q9UBX8 382 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 TEKT2Q9UIF3 430 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 COL4A3Q01955 1670 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 A0A0A6YYJ9 748 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 ISM1B1AKI9 464 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 H7C4K7 107 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 KPNA5O15131 536 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 ORC5O43913 435 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 EPPINO95925 133 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 EFEMP2O95967 443 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 IL3P08700 152 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 GIPRP48546 466 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 GINS1Q14691 196 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 C17orf99Q6UX52 265 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 DEF8Q6ZN54 512 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 SLC37A3Q8NCC5 494 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 MORN4Q8NDC4 146 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 UPF1Q92900 1129 aaKnown RBP eCLIP14.53□□□□□ -0.085e-9■■■■■ 31.6
SDF4-207ENST00000494748 UCN3Q969E3 161 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 SERHL2Q9H4I8 314 aa14.53□□□□□ -0.08
SDF4-207ENST00000494748 SLC22A5O76082 557 aa14.52□□□□□ -0.08
SDF4-207ENST00000494748 NPPBP16860 134 aa14.52□□□□□ -0.08
SDF4-207ENST00000494748 BMP8BP34820 402 aa14.52□□□□□ -0.08
SDF4-207ENST00000494748 PIN1Q13526 163 aaPredicted RBP14.52□□□□□ -0.08
SDF4-207ENST00000494748 TNFAIP8L2Q6P589 184 aaPredicted RBP14.52□□□□□ -0.08
SDF4-207ENST00000494748 TEX261Q6UWH6 196 aa14.52□□□□□ -0.08
SDF4-207ENST00000494748 BMP8AQ7Z5Y6 402 aa14.52□□□□□ -0.08
SDF4-207ENST00000494748 MRGPREQ86SM8 312 aa14.52□□□□□ -0.08
SDF4-207ENST00000494748 OR11H4Q8NGC9 324 aa14.52□□□□□ -0.08
SDF4-207ENST00000494748 RNFT2Q96EX2 444 aa14.52□□□□□ -0.08
SDF4-207ENST00000494748 ZNF354BQ96LW1 612 aa14.52□□□□□ -0.08
SDF4-207ENST00000494748 SORBS1Q9BX66 1292 aaKnown RBP14.52□□□□□ -0.08
SDF4-207ENST00000494748 SUV39H2Q9H5I1 410 aa14.52□□□□□ -0.08
SDF4-207ENST00000494748 TMEM161AQ9NX61 479 aa14.52□□□□□ -0.08
SDF4-207ENST00000494748 SPEF1Q9Y4P9 236 aa14.52□□□□□ -0.08
SDF4-207ENST00000494748 U3KQ87 197 aa14.52□□□□□ -0.08
SDF4-207ENST00000494748 INMT-MINDY4F8WBC2 141 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 POLR2CP19387 275 aaPredicted RBP14.52□□□□□ -0.09
SDF4-207ENST00000494748 RAB40BQ12829 278 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 GPR176Q14439 515 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 FAM205BPQ63HN1 556 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 BRAT1Q6PJG6 821 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 SHFQ7M4L6 423 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 TECPR1Q7Z6L1 1165 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 OR11H7Q8NGC8 314 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 UFD1Q92890 307 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 MTERF3Q96E29 417 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 LMLNQ96KR4 655 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 COQ7Q99807 217 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 COL4A6Q14031 1691 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 SLC5A10A0PJK1 596 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 RFPL3O75679 317 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 KLK1P06870 262 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 RAB25P57735 213 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 FCN2Q15485 313 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 ZNF658BQ4V348 819 aaPredicted RBP14.52□□□□□ -0.09
SDF4-207ENST00000494748 KIAA1211LQ6NV74 962 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 ANKRD54Q6NXT1 300 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 ZNF480Q8WV37 535 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 VN1R3Q9BXE9 311 aa14.52□□□□□ -0.09
SDF4-207ENST00000494748 THSD7BQ9C0I4 1608 aa14.51□□□□□ -0.09
SDF4-207ENST00000494748 TEX51A0A1B0GUA7 166 aa14.51□□□□□ -0.09
SDF4-207ENST00000494748 PIPSLA2A3N6 862 aa14.51□□□□□ -0.09
SDF4-207ENST00000494748 HMGN4O00479 90 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms