RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 LRRC49Q8IUZ0 686 aa2.21□□□□□ -2.06
LRIF1-203ENST00000494675 LRRC17Q8N6Y2 441 aa2.21□□□□□ -2.06
LRIF1-203ENST00000494675 COLGALT1Q8NBJ5 622 aa2.21□□□□□ -2.06
LRIF1-203ENST00000494675 OR8H1Q8NGG4 311 aa2.21□□□□□ -2.06
LRIF1-203ENST00000494675 TMEM37Q8WXS4 190 aa2.21□□□□□ -2.06
LRIF1-203ENST00000494675 CAPNS2Q96L46 248 aa2.21□□□□□ -2.06
LRIF1-203ENST00000494675 DEFB118Q96PH6 123 aa2.21□□□□□ -2.06
LRIF1-203ENST00000494675 CBWD1Q9BRT8 395 aa2.21□□□□□ -2.06
LRIF1-203ENST00000494675 FTHL17Q9BXU8 183 aa2.21□□□□□ -2.06
LRIF1-203ENST00000494675 PUS3Q9BZE2 481 aaKnown RBP2.21□□□□□ -2.06
LRIF1-203ENST00000494675 Q9HAA7 133 aa2.21□□□□□ -2.06
LRIF1-203ENST00000494675 IL1RL2Q9HB29 575 aa2.21□□□□□ -2.06
LRIF1-203ENST00000494675 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.21□□□□□ -2.06
LRIF1-203ENST00000494675 MRPL11Q9Y3B7 192 aaKnown RBP2.21□□□□□ -2.06
LRIF1-203ENST00000494675 TDRD15B5MCY1 1934 aaKnown RBP2.2□□□□□ -2.06
LRIF1-203ENST00000494675 IGKV3D-20A0A0C4DH25 116 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 IGHV3-16A0A0C4DH30 117 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 A0A0U1RRA0 63 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 SH3BGRLO75368 114 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 PDGFBP01127 241 aaPredicted RBP2.2□□□□□ -2.06
LRIF1-203ENST00000494675 ALPPP05187 535 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 PTMAP06454 111 aaKnown RBP2.2□□□□□ -2.06
LRIF1-203ENST00000494675 CCDC159P0C7I6 412 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 ALPPL2P10696 532 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 TMOD1P28289 359 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 NPY2RP49146 381 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 NUMBP49757 651 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 SLC1A5Q15758 541 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 VWA2Q5GFL6 755 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 ZNF506Q5JVG8 444 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 LEMD1Q68G75 181 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 RHBDD2Q6NTF9 364 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 TATDN1Q6P1N9 297 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 ABRAXAS1Q6UWZ7 409 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 MFSD7Q6UXD7 560 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 C1orf186Q6ZWK4 172 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 YRDCQ86U90 279 aaKnown RBP2.2□□□□□ -2.06
LRIF1-203ENST00000494675 LUZP1Q86V48 1076 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 POM121L12Q8N7R1 296 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 MLKLQ8NB16 471 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 CSNK1G2-AS1Q8NCQ2 148 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 BEST4Q8NFU0 473 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 RSPH1Q8WYR4 309 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 PHYHIPQ92561 330 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 RBM18Q96H35 190 aaKnown RBP2.2□□□□□ -2.06
LRIF1-203ENST00000494675 NLNQ9BYT8 704 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 SIRPDQ9H106 197 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 RNF41Q9H4P4 317 aaPredicted RBP2.2□□□□□ -2.06
LRIF1-203ENST00000494675 FAM124BQ9H5Z6 455 aaPredicted RBP2.2□□□□□ -2.06
LRIF1-203ENST00000494675 NAP1L2Q9ULW6 460 aaPredicted RBP2.2□□□□□ -2.06
LRIF1-203ENST00000494675 NUDCQ9Y266 331 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 ATG4BQ9Y4P1 393 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 GPRASP1Q5JY77 1395 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 NPC1L1Q9UHC9 1359 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 PCNX3Q9H6A9 2034 aa2.2□□□□□ -2.06
LRIF1-203ENST00000494675 RNF103-CHMP3A0A140T963 221 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 TMEM89A2RUT3 159 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 KRT87PA6NCN2 255 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 SEC22BO75396 215 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 SEMA4FO95754 770 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 HPP00738 406 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 MT-ATP6P00846 226 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 IGHDP01880 384 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 HCKP08631 526 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 GATA1P15976 413 aaPredicted RBP2.19□□□□□ -2.06
LRIF1-203ENST00000494675 GAP43P17677 238 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 IL4RP24394 825 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 HSPA1LP34931 641 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 TRIM23P36406 574 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 MATKP42679 507 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 PRELPP51888 382 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 ZFP36L1Q07352 338 aaKnown RBP2.19□□□□□ -2.06
LRIF1-203ENST00000494675 CYLC2Q14093 348 aaPredicted RBP2.19□□□□□ -2.06
LRIF1-203ENST00000494675 GAMTQ14353 236 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 ANKRD55Q3KP44 614 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 WDR25Q64LD2 544 aaPredicted RBP2.19□□□□□ -2.06
LRIF1-203ENST00000494675 SEL1L3Q68CR1 1132 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 NEK5Q6P3R8 708 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 REG3GQ6UW15 175 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 PYROXD2Q8N2H3 581 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 U2AF1L4Q8WU68 220 aaKnown RBP2.19□□□□□ -2.06
LRIF1-203ENST00000494675 P3H4Q92791 437 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 TMEM186Q96B77 213 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 ACCSQ96QU6 501 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 NRN1Q9NPD7 142 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 ABCC13Q9NSE7 274 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 LHX3Q9UBR4 397 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 CIDEBQ9UHD4 219 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 IKZF3Q9UKT9 509 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 EMCNQ9ULC0 261 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 ODF2LQ9ULJ1 636 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 PLA2G4CQ9UP65 541 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 ZNF175Q9Y473 711 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 RAD54L2Q9Y4B4 1467 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 A0A0A6YYD4 124 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 FOXI3A8MTJ6 420 aaPredicted RBP2.19□□□□□ -2.06
LRIF1-203ENST00000494675 CYB561D2O14569 222 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 EI24O14681 340 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 MCF2LO15068 1137 aa2.19□□□□□ -2.06
LRIF1-203ENST00000494675 LRRTM2O43300 516 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms