RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 TIFABQ6ZNK6 161 aa8.83□□□□□ -1
MSH5-218ENST00000494646 GDF7Q7Z4P5 450 aa8.83□□□□□ -1
MSH5-218ENST00000494646 TAGAPQ8N103 731 aa8.83□□□□□ -1
MSH5-218ENST00000494646 SLC15A4Q8N697 577 aa8.83□□□□□ -1
MSH5-218ENST00000494646 ZNF615Q8N8J6 731 aa8.83□□□□□ -1
MSH5-218ENST00000494646 CDYL2Q8N8U2 506 aa8.83□□□□□ -1
MSH5-218ENST00000494646 SIMC1Q8NDZ2 872 aa8.83□□□□□ -1
MSH5-218ENST00000494646 ADCY4Q8NFM4 1077 aa8.83□□□□□ -1
MSH5-218ENST00000494646 PAQR8Q8TEZ7 354 aa8.83□□□□□ -1
MSH5-218ENST00000494646 RND1Q92730 232 aa8.83□□□□□ -1
MSH5-218ENST00000494646 DIO2Q92813 273 aa8.83□□□□□ -1
MSH5-218ENST00000494646 UCN2Q96RP3 112 aa8.83□□□□□ -1
MSH5-218ENST00000494646 BRINP2Q9C0B6 783 aa8.83□□□□□ -1
MSH5-218ENST00000494646 SH2D2AQ9NP31 389 aa8.83□□□□□ -1
MSH5-218ENST00000494646 ZFP64Q9NPA5 681 aa8.83□□□□□ -1
MSH5-218ENST00000494646 BCAP29Q9UHQ4 241 aa8.83□□□□□ -1
MSH5-218ENST00000494646 CES1P1Q9UKY3 287 aa8.83□□□□□ -1
MSH5-218ENST00000494646 SNX6Q9UNH7 406 aa8.83□□□□□ -1
MSH5-218ENST00000494646 PCDHA9Q9Y5H5 950 aa8.83□□□□□ -1
MSH5-218ENST00000494646 NPFFR2Q9Y5X5 522 aa8.83□□□□□ -1
MSH5-218ENST00000494646 POLQO75417 2590 aa8.83□□□□□ -1
MSH5-218ENST00000494646 MED12Q93074 2177 aa8.83□□□□□ -1
MSH5-218ENST00000494646 PCNX3Q9H6A9 2034 aa8.82□□□□□ -1
MSH5-218ENST00000494646 TRGV5A0A0B4J1U4 118 aa8.82□□□□□ -1
MSH5-218ENST00000494646 A0A1W2PPM1 405 aa8.82□□□□□ -1
MSH5-218ENST00000494646 C1orf226A1L170 272 aa8.82□□□□□ -1
MSH5-218ENST00000494646 OR6C76A6NM76 312 aa8.82□□□□□ -1
MSH5-218ENST00000494646 MANBAO00462 879 aa8.82□□□□□ -1
MSH5-218ENST00000494646 AQP7O14520 342 aa8.82□□□□□ -1
MSH5-218ENST00000494646 TRAPPC6AO75865 159 aa8.82□□□□□ -1
MSH5-218ENST00000494646 ESRRBO95718 433 aa8.82□□□□□ -1
MSH5-218ENST00000494646 IGHG3P01860 377 aa8.82□□□□□ -1
MSH5-218ENST00000494646 FBXO45P0C2W1 286 aa8.82□□□□□ -1
MSH5-218ENST00000494646 CPMP14384 443 aa8.82□□□□□ -1
MSH5-218ENST00000494646 IMPDH1P20839 514 aa8.82□□□□□ -1
MSH5-218ENST00000494646 S1PR1P21453 382 aa8.82□□□□□ -1
MSH5-218ENST00000494646 PTGER4P35408 488 aa8.82□□□□□ -1
MSH5-218ENST00000494646 KRTAP10-9P60411 292 aa8.82□□□□□ -1
MSH5-218ENST00000494646 DUSP2Q05923 314 aa8.82□□□□□ -1
MSH5-218ENST00000494646 MGAT2Q10469 447 aa8.82□□□□□ -1
MSH5-218ENST00000494646 GALNT1Q10472 559 aaPredicted RBP8.82□□□□□ -1
MSH5-218ENST00000494646 FUT7Q11130 342 aa8.82□□□□□ -1
MSH5-218ENST00000494646 EXOSC7Q15024 291 aaKnown RBP8.82□□□□□ -1
MSH5-218ENST00000494646 NTRK2Q16620 822 aa8.82□□□□□ -1
MSH5-218ENST00000494646 HYAL4Q2M3T9 481 aa8.82□□□□□ -1
MSH5-218ENST00000494646 GGTA1PQ4G0N0 100 aa8.82□□□□□ -1
MSH5-218ENST00000494646 TMEM198Q66K66 360 aa8.82□□□□□ -1
MSH5-218ENST00000494646 SLC48A1Q6P1K1 146 aa8.82□□□□□ -1
MSH5-218ENST00000494646 TRMT10CQ7L0Y3 403 aaKnown RBP8.82□□□□□ -1
MSH5-218ENST00000494646 COMMD6Q7Z4G1 85 aa8.82□□□□□ -1
MSH5-218ENST00000494646 GALNT12Q8IXK2 581 aa8.82□□□□□ -1
MSH5-218ENST00000494646 GSPT2Q8IYD1 628 aaKnown RBP8.82□□□□□ -1
MSH5-218ENST00000494646 CCDC116Q8IYX3 515 aa8.82□□□□□ -1
MSH5-218ENST00000494646 C1orf52Q8N6N3 182 aaKnown RBP8.82□□□□□ -1
MSH5-218ENST00000494646 ZNF441Q8N8Z8 693 aa8.82□□□□□ -1
MSH5-218ENST00000494646 MYRIPQ8NFW9 859 aa8.82□□□□□ -1
MSH5-218ENST00000494646 LILRB4Q8NHJ6 448 aa8.82□□□□□ -1
MSH5-218ENST00000494646 METTL6Q8TCB7 284 aa8.82□□□□□ -1
MSH5-218ENST00000494646 ASB5Q8WWX0 329 aa8.82□□□□□ -1
MSH5-218ENST00000494646 ADIPOR1Q96A54 375 aa8.82□□□□□ -1
MSH5-218ENST00000494646 TP53INP1Q96A56 240 aa8.82□□□□□ -1
MSH5-218ENST00000494646 TMEM237Q96Q45 408 aa8.82□□□□□ -1
MSH5-218ENST00000494646 DOHHQ9BU89 302 aa8.82□□□□□ -1
MSH5-218ENST00000494646 C1QTNF3Q9BXJ4 246 aa8.82□□□□□ -1
MSH5-218ENST00000494646 TRIM8Q9BZR9 551 aa8.82□□□□□ -1
MSH5-218ENST00000494646 NMRK1Q9NWW6 199 aa8.82□□□□□ -1
MSH5-218ENST00000494646 CNIH4Q9P003 139 aa8.82□□□□□ -1
MSH5-218ENST00000494646 SPRR3Q9UBC9 169 aa8.82□□□□□ -1
MSH5-218ENST00000494646 VPS29Q9UBQ0 182 aa8.82□□□□□ -1
MSH5-218ENST00000494646 TRPS1Q9UHF7 1281 aa8.82□□□□□ -1
MSH5-218ENST00000494646 ADAM29Q9UKF5 820 aa8.82□□□□□ -1
MSH5-218ENST00000494646 ITGB1BP2Q9UKP3 347 aa8.82□□□□□ -1
MSH5-218ENST00000494646 CNOT11Q9UKZ1 510 aaKnown RBP8.82□□□□□ -1
MSH5-218ENST00000494646 PSME2Q9UL46 239 aa8.82□□□□□ -1
MSH5-218ENST00000494646 BOKQ9UMX3 212 aaPredicted RBP8.82□□□□□ -1
MSH5-218ENST00000494646 TIMM22Q9Y584 194 aa8.82□□□□□ -1
MSH5-218ENST00000494646 CHCHD2Q9Y6H1 151 aaPredicted RBP8.82□□□□□ -1
MSH5-218ENST00000494646 MPDZO75970 2070 aa8.82□□□□□ -1
MSH5-218ENST00000494646 OTOGQ6ZRI0 2925 aa8.81□□□□□ -1
MSH5-218ENST00000494646 A0A1B0GVC2 190 aa8.81□□□□□ -1
MSH5-218ENST00000494646 CAPN14A8MX76 684 aa8.81□□□□□ -1
MSH5-218ENST00000494646 KIF2AO00139 706 aaPredicted RBP8.81□□□□□ -1
MSH5-218ENST00000494646 TP53I11O14683 189 aa8.81□□□□□ -1
MSH5-218ENST00000494646 BCKDKO14874 412 aa8.81□□□□□ -1
MSH5-218ENST00000494646 SUSD5O60279 629 aa8.81□□□□□ -1
MSH5-218ENST00000494646 GUCY1B2O75343 617 aa8.81□□□□□ -1
MSH5-218ENST00000494646 ULK1O75385 1050 aa8.81□□□□□ -1
MSH5-218ENST00000494646 NME6O75414 186 aaPredicted RBP8.81□□□□□ -1
MSH5-218ENST00000494646 ABHD2P08910 425 aa8.81□□□□□ -1
MSH5-218ENST00000494646 GLI4P10075 376 aa8.81□□□□□ -1
MSH5-218ENST00000494646 ATP5F1P24539 256 aaPredicted RBP8.81□□□□□ -1
MSH5-218ENST00000494646 ACVR2AP27037 513 aa8.81□□□□□ -1
MSH5-218ENST00000494646 HMOX2P30519 316 aa8.81□□□□□ -1
MSH5-218ENST00000494646 CHRNB4P30926 498 aa8.81□□□□□ -1
MSH5-218ENST00000494646 TOMM20Q15388 145 aa8.81□□□□□ -1
MSH5-218ENST00000494646 LTB4RQ15722 352 aa8.81□□□□□ -1
MSH5-218ENST00000494646 NNATQ16517 81 aa8.81□□□□□ -1
MSH5-218ENST00000494646 PRICKLE4Q2TBC4 344 aa8.81□□□□□ -1
MSH5-218ENST00000494646 TRMT12Q53H54 448 aaKnown RBP8.81□□□□□ -1
MSH5-218ENST00000494646 WLSQ5T9L3 541 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms