RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 RPGRIP1Q96KN7 1286 aa3.69□□□□□ -1.82
NCL-210ENST00000494618 FUNDC2Q9BWH2 189 aa3.69□□□□□ -1.82
NCL-210ENST00000494618 TRIM9Q9C026 710 aa3.69□□□□□ -1.82
NCL-210ENST00000494618 CNIH4Q9P003 139 aa3.69□□□□□ -1.82
NCL-210ENST00000494618 VPS54Q9P1Q0 977 aa3.69□□□□□ -1.82
NCL-210ENST00000494618 PRODH2Q9UF12 536 aa3.69□□□□□ -1.82
NCL-210ENST00000494618 EMCNQ9ULC0 261 aa3.69□□□□□ -1.82
NCL-210ENST00000494618 DIMT1Q9UNQ2 313 aaKnown RBP3.69□□□□□ -1.82
NCL-210ENST00000494618 A0A0A6YYC8 382 aaPredicted RBP3.68□□□□□ -1.82
NCL-210ENST00000494618 A0A0A6YYD4 124 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 A0A0U1RQK1 487 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 ZNF320A2RRD8 509 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 I3L1I5 382 aaPredicted RBP3.68□□□□□ -1.82
NCL-210ENST00000494618 CDX4O14627 284 aaPredicted RBP3.68□□□□□ -1.82
NCL-210ENST00000494618 ZNF263O14978 683 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 SFTPBP07988 381 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 FERP16591 822 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 ACP1P24666 158 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 ROR1Q01973 937 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 CAPRIN1Q14444 709 aaKnown RBP3.68□□□□□ -1.82
NCL-210ENST00000494618 STOX1Q6ZVD7 989 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 ASRGL1Q7L266 308 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 UBQLNLQ8IYU4 475 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 RELL2Q8NC24 303 aaPredicted RBP3.68□□□□□ -1.82
NCL-210ENST00000494618 SLCO4A1Q96BD0 722 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 COG3Q96JB2 828 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 MAGEB18Q96M61 343 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 LINC00167Q96N53 147 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 FAM173AQ9BQD7 235 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 ADGRL4Q9HBW9 690 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 ACOXLQ9NUZ1 547 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 DNAJC11Q9NVH1 559 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 TRPC4Q9UBN4 977 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 KIF7Q2M1P5 1343 aa3.68□□□□□ -1.82
NCL-210ENST00000494618 IGHV3-35A0A0C4DH35 117 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 A8MX80 341 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 HDAC3O15379 428 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 LYPD3O95274 346 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 APBB3O95704 486 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 UROSP10746 265 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 PVRP15151 417 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 MGMTP16455 207 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 ACADSBP45954 432 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 TKTL1P51854 596 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 ISXQ2M1V0 245 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 IFI44LQ53G44 452 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 PRAMEF8Q5VWM4 474 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 ARMC3Q5W041 872 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 Q8N9G6 341 aaPredicted RBP3.67□□□□□ -1.82
NCL-210ENST00000494618 FAF2Q96CS3 445 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 JAKMIP1Q96N16 626 aaKnown RBP3.67□□□□□ -1.82
NCL-210ENST00000494618 CASD1Q96PB1 797 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 GPR174Q9BXC1 333 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 CACNG6Q9BXT2 260 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 TSPYL1Q9H0U9 437 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 ERVK-18Q9QC07 812 aa3.67□□□□□ -1.82
NCL-210ENST00000494618 FOXA2Q9Y261 457 aaPredicted RBP3.67□□□□□ -1.82
NCL-210ENST00000494618 CYB561D2O14569 222 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 DUSP14O95147 198 aaKnown RBP3.66□□□□□ -1.82
NCL-210ENST00000494618 IGHV3-9P01782 118 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 CENPBP07199 599 aaPredicted RBP3.66□□□□□ -1.82
NCL-210ENST00000494618 SERPINF2P08697 491 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 P0C879 139 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 SLC35E2P0CK97 266 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 LAMP1P11279 417 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 ARHGDIBP52566 201 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 ZNF131P52739 623 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 RPS4XP62701 263 aaKnown RBP3.66□□□□□ -1.82
NCL-210ENST00000494618 CD47Q08722 323 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 KLF5Q13887 457 aaPredicted RBP3.66□□□□□ -1.82
NCL-210ENST00000494618 RCN2Q14257 317 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 KRT31Q15323 416 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 TGIF1Q15583 401 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 MS4A13Q5J8X5 152 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 GLRA4Q5JXX5 417 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 CDC42EP5Q6NZY7 148 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 ERICH1Q86X53 443 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 APOBEC3FQ8IUX4 373 aaKnown RBP3.66□□□□□ -1.82
NCL-210ENST00000494618 STHQ8IWL8 128 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 TMCO5AQ8N6Q1 288 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 NAT8LQ8N9F0 302 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 C9orf85Q96MD7 179 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 DCLRE1BQ9H816 532 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 MAD2L2Q9UI95 211 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 STX8Q9UNK0 236 aa3.66□□□□□ -1.82
NCL-210ENST00000494618 MRPS2Q9Y399 296 aaKnown RBP3.66□□□□□ -1.82
NCL-210ENST00000494618 NPIPA5A0A0B4J1W7 369 aa3.65□□□□□ -1.83
NCL-210ENST00000494618 NPIPA5E9PKD4 350 aa3.65□□□□□ -1.83
NCL-210ENST00000494618 CHEK1O14757 476 aa3.65□□□□□ -1.83
NCL-210ENST00000494618 SH2D1BO14796 132 aa3.65□□□□□ -1.83
NCL-210ENST00000494618 HERV-K104P63124 156 aa3.65□□□□□ -1.83
NCL-210ENST00000494618 GK2Q14410 553 aaPredicted RBP3.65□□□□□ -1.83
NCL-210ENST00000494618 C2orf83Q53S99 150 aa3.65□□□□□ -1.83
NCL-210ENST00000494618 PAN3Q58A45 887 aaKnown RBP3.65□□□□□ -1.83
NCL-210ENST00000494618 TCHHL1Q5QJ38 904 aaPredicted RBP3.65□□□□□ -1.83
NCL-210ENST00000494618 C9orf129Q5T035 196 aaKnown RBP3.65□□□□□ -1.83
NCL-210ENST00000494618 ZNF658Q5TYW1 1059 aaPredicted RBP3.65□□□□□ -1.83
NCL-210ENST00000494618 RAPH1Q70E73 1250 aa3.65□□□□□ -1.83
NCL-210ENST00000494618 PIWIL3Q7Z3Z3 882 aaKnown RBP3.65□□□□□ -1.83
NCL-210ENST00000494618 PRSS42Q7Z5A4 293 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms