RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 RUNDC3BQ96NL0 473 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 ATOH8Q96SQ7 321 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 SOSTQ9BQB4 213 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 NT5DC2Q9H857 520 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 HEXA-AS1Q9H8Q6 139 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 ANO10Q9NW15 660 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 EIF3KQ9UBQ5 218 aaKnown RBP3.61□□□□□ -1.83
SMC4-224ENST00000494612 NARFQ9UHQ1 456 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 MGAT4AQ9UM21 535 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 RPH3AQ9Y2J0 694 aaPredicted RBP3.61□□□□□ -1.83
SMC4-224ENST00000494612 STYXL1Q9Y6J8 313 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 PRSS21Q9Y6M0 314 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 PZPP20742 1482 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 NLRP1Q9C000 1473 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 ARHGAP35Q9NRY4 1499 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 ROBO1Q9Y6N7 1651 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 IGHV3OR16-10A0A075B7F0 116 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 A0A0U1RRA0 63 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 RPL37AP8A6NKH3 93 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 ZNF724A8MTY0 619 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 K7EQG2 157 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 CCSO14618 274 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 PI15O43692 258 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 PTMSP20962 102 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 AHCYP23526 432 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 TRIM23P36406 574 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 ETV5P41161 510 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 RAG2P55895 527 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 FCHO2Q0JRZ9 810 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 RIGQ13278 110 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 MEF2DQ14814 521 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 EXOSC7Q15024 291 aaKnown RBP3.6□□□□□ -1.83
SMC4-224ENST00000494612 MUC21Q5SSG8 566 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 TEX35Q5T0J7 233 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 NKAIN2Q5VXU1 208 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 LIPJQ5W064 366 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 OR6B2Q6IFH4 312 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 STEAP1BQ6NZ63 245 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 ISLR2Q6UXK2 745 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 C1orf186Q6ZWK4 172 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 RPAINQ86UA6 219 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 C17orf64Q86WR6 236 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 CCDC71Q8IV32 467 aaPredicted RBP3.6□□□□□ -1.83
SMC4-224ENST00000494612 BATF2Q8N1L9 274 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 CHCHD4Q8N4Q1 142 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 ICA1LQ8NDH6 482 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 CHDHQ8NE62 594 aaPredicted RBP3.6□□□□□ -1.83
SMC4-224ENST00000494612 SLCO4A1Q96BD0 722 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 EEF2KMTQ96G04 330 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 CDHR1Q96JP9 859 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 LRRCC1Q9C099 1032 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 TMEM245Q9H330 911 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 MOB1AQ9H8S9 216 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 PRMT8Q9NR22 394 aaPredicted RBP3.6□□□□□ -1.83
SMC4-224ENST00000494612 THYN1Q9P016 225 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 ERVK-18Q9QC07 812 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 CTSZQ9UBR2 303 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 MIA2Q96PC5 1412 aa3.6□□□□□ -1.83
SMC4-224ENST00000494612 GPATCH8Q9UKJ3 1502 aaKnown RBP3.6□□□□□ -1.83
SMC4-224ENST00000494612 ZC3H13Q5T200 1668 aaKnown RBP3.59□□□□□ -1.83
SMC4-224ENST00000494612 PHLPP1O60346 1717 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 XIRP1Q702N8 1843 aaKnown RBP3.59□□□□□ -1.83
SMC4-224ENST00000494612 SHISA9B4DS77 424 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 SH2D1BO14796 132 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 HPRP00739 348 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 PROS1P07225 676 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 ZCCHC18P0CG32 403 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 GNSP15586 552 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 SLC1A4P43007 532 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 ZFP36L2P47974 494 aaKnown RBP3.59□□□□□ -1.83
SMC4-224ENST00000494612 RIDAP52758 137 aaKnown RBP3.59□□□□□ -1.83
SMC4-224ENST00000494612 CCZ1BP86790 482 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 CCZ1P86791 482 aaPredicted RBP3.59□□□□□ -1.83
SMC4-224ENST00000494612 COX10Q12887 443 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 TMEM44Q2T9K0 475 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 CDC42EP5Q6NZY7 148 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 DLEU7Q6UYE1 221 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 ADGRD2Q7Z7M1 963 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 Q8N377 158 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 ZNF781Q8N8C0 355 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 LEMD2Q8NC56 503 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 OR1K1Q8NGR3 316 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 OR1B1Q8NGR6 318 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 OR4Q3Q8NH05 313 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 KIAA1524Q8TCG1 905 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 C11orf52Q96A22 123 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 DEFB118Q96PH6 123 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 ADNPQ9H2P0 1102 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 TNMDQ9H2S6 317 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 TUBB1Q9H4B7 451 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 JPT2Q9H910 190 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 SP140LQ9H930 580 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 VPS54Q9P1Q0 977 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 IL19Q9UHD0 177 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 TSPAN16Q9UKR8 245 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 IKZF3Q9UKT9 509 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.59□□□□□ -1.83
SMC4-224ENST00000494612 CCNB3Q8WWL7 1395 aa3.59□□□□□ -1.83
SMC4-224ENST00000494612 FAM135BQ49AJ0 1406 aa3.59□□□□□ -1.84
SMC4-224ENST00000494612 KIAA1107Q9UPP5 1409 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms