RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 PWP1Q13610 501 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 MAPRE2Q15555 327 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 SGO1Q5FBB7 561 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 TCHHL1Q5QJ38 904 aaPredicted RBP10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 GARNL3Q5VVW2 1013 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 PRAMEF9Q5VWM5 478 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 FAM91A1Q658Y4 838 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 ACSM2BQ68CK6 577 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 NIPAL1Q6NVV3 410 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 LARP4Q71RC2 724 aaKnown RBP eCLIP10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 TRPM8Q7Z2W7 1104 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 CD163Q86VB7 1156 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 GHDCQ8N2G8 530 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 CAMKVQ8NCB2 501 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 PEX11GQ96HA9 241 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 PPP1R36Q96LQ0 422 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 MTERF1Q99551 399 aaKnown RBP10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 ACPTQ9BZG2 426 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 ROGDIQ9GZN7 287 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 WDR55Q9H6Y2 383 aaPredicted RBP10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 SLC12A4Q9UP95 1085 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 CAPN7Q9Y6W3 813 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 DNAJC13O75165 2243 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 FBN3Q75N90 2809 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 ABCA4P78363 2273 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 E9PLN8 166 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 FCHO1O14526 889 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 HS6ST1O60243 411 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 CDC40O60508 579 aaKnown RBP eCLIP10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 SEC22BO75396 215 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 SLC25A12O75746 678 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 JUNP05412 331 aaKnown RBP10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 TPOP07202 933 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 PRPS2P11908 318 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 ZNF24P17028 368 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 IGFBP2P18065 325 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 NCF2P19878 526 aaPredicted RBP10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 DNAJA1P31689 397 aaKnown RBP10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 BCL6P41182 706 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 IST1P53990 364 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 RPL38P63173 70 aaKnown RBP10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 MEF2AQ02078 507 aaPredicted RBP10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 EMX2Q04743 252 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 FAM53BQ14153 422 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 RPS6KA2Q15349 733 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 AP5B1Q2VPB7 878 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 GALNTL6Q49A17 601 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 ASPGQ86U10 573 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 TMEM200AQ86VY9 491 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 M1APQ8TC57 530 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 ERP27Q96DN0 273 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 OR52B2Q96RD2 323 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 VKORC1Q9BQB6 163 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 TMUB1Q9BVT8 246 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 MS4A8Q9BY19 250 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 AKTIPQ9H8T0 292 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 MMP25Q9NPA2 562 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 LANCL2Q9NS86 450 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 TNFRSF10DQ9UBN6 386 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 RNF6Q9Y252 685 aa10.93□□□□□ -0.66
CSNK1E-212ENST00000494610 ATP6AP2A0A1C7CYW4 349 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 A8MUA0 341 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 MAGEB17A8MXT2 336 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 H0YIG0 161 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 PRRG2O14669 202 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 NDUFS4O43181 175 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 NME2P1O60361 137 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 HNRNPCL1O60812 293 aaKnown RBP10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 PEX11AO75192 247 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 ATP6AP2O75787 350 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 TOXO94900 526 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 NSA2O95478 260 aaKnown RBP10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 CD99P14209 185 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 NME2P22392 152 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 RPL3P39023 403 aaKnown RBP10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 ASMTP46597 345 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 CLNS1AP54105 237 aaKnown RBP10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 SLC26A5P58743 744 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 GPR85P60893 370 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 RPS13P62277 151 aaKnown RBP10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 HMGCS1Q01581 520 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 ACTN3Q08043 901 aaPredicted RBP10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 HYAL2Q12891 473 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 NSDHLQ15738 373 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 EMC4Q5J8M3 183 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 C6orf136Q5SQH8 315 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 KHDRBS2Q5VWX1 349 aaKnown RBP10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 TMEM214Q6NUQ4 689 aaKnown RBP10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 TRIM40Q6P9F5 258 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 C16orf47Q6ZP98 133 aaPredicted RBP10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 Q6ZSR9 355 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 ABHD13Q7L211 337 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 MTDHQ86UE4 582 aaKnown RBP10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 NUDT13Q86X67 352 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 MIER2Q8N344 545 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 TMEM178AQ8NBL3 297 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 OR52N2Q8NGI0 321 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 FAM57AQ8TBR7 257 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 NT5CQ8TCD5 201 aa10.92□□□□□ -0.66
CSNK1E-212ENST00000494610 PHF10Q8WUB8 498 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms