RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 AP1M2Q9Y6Q5 423 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 CROCCQ5TZA2 2017 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 MYO9AB2RTY4 2548 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 MYO7BQ6PIF6 2116 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 CREBBPQ92793 2442 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 RNF103-CHMP3A0A140T963 221 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 LOC100653049A0A140TA62 436 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 A0A1W2PQ72 361 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 FITM1A5D6W6 292 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 ZNF195O14628 629 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 DSCR3O14972 297 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 P2RX6O15547 441 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 PLIN3O60664 434 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 NOS1APO75052 506 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-234ENST00000493923 TRIM3O75382 744 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-234ENST00000493923 NDUFS3O75489 264 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 BANF1O75531 89 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 KRT34O76011 436 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 MFN2O95140 757 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 GABARAPO95166 117 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 MATN4O95460 622 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 HSPA4LO95757 839 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 ONECUT2O95948 504 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 S1PR4O95977 384 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 IFNA16P05015 189 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 CELA2AP08217 269 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 UMPSP11172 480 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 ERGP11308 486 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 GP1BBP13224 206 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 ENO3P13929 434 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-234ENST00000493923 TPSB2P20231 275 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 EEF1B2P24534 225 aaKnown RBP7.7□□□□□ -1.18
HDAC6-234ENST00000493923 PSMA4P25789 261 aaKnown RBP7.7□□□□□ -1.18
HDAC6-234ENST00000493923 TALDO1P37837 337 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 ELK3P41970 407 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 MAGEA6P43360 314 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 CBX5P45973 191 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 TTPAP49638 278 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 ST13P50502 369 aaKnown RBP7.7□□□□□ -1.18
HDAC6-234ENST00000493923 PRSS12P56730 875 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 PSME3P61289 254 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 TIAL1Q01085 375 aaKnown RBP eCLIP7.7□□□□□ -1.18
HDAC6-234ENST00000493923 GALK2Q01415 458 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 SF1Q15637 639 aaKnown RBP7.7□□□□□ -1.18
HDAC6-234ENST00000493923 TPSAB1Q15661 275 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 MTX3Q5HYI7 312 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 VWA5B1Q5TIE3 1220 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 METTL2BQ6P1Q9 378 aaKnown RBP7.7□□□□□ -1.18
HDAC6-234ENST00000493923 KIRREL2Q6UWL6 708 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 ISLR2Q6UXK2 745 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 USP51Q70EK9 711 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 OVCH1Q7RTY7 1134 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 CUZD1Q86UP6 607 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 DHFR2Q86XF0 187 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 PLD3Q8IV08 490 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 CCDC103Q8IW40 242 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 CISD2Q8N5K1 135 aaKnown RBP7.7□□□□□ -1.18
HDAC6-234ENST00000493923 LINC00469Q8N7U9 141 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 OR2L3Q8NG85 312 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 OR10Z1Q8NGY1 313 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 RHOXF1Q8NHV9 184 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 RDH11Q8TC12 318 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 PROKR1Q8TCW9 393 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 NCLNQ969V3 563 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 ATP6V1E2Q96A05 226 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 PNPLA2Q96AD5 504 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 SNRNP40Q96DI7 357 aaKnown RBP7.7□□□□□ -1.18
HDAC6-234ENST00000493923 SORT1Q99523 831 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 PKP4Q99569 1192 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 DPH2Q9BQC3 489 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-234ENST00000493923 TMEM246Q9BRR3 403 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 NDC1Q9BTX1 674 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 MECRQ9BV79 373 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 IL22Q9GZX6 179 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 MMP27Q9H306 513 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 SERHL2Q9H4I8 314 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 PLAC1Q9HBJ0 212 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 MRM3Q9HC36 420 aaKnown RBP7.7□□□□□ -1.18
HDAC6-234ENST00000493923 CCM2LQ9NUG4 571 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-234ENST00000493923 BFARQ9NZS9 450 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-234ENST00000493923 GPN3Q9UHW5 284 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-234ENST00000493923 SLC39A10Q9ULF5 831 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 MRPS2Q9Y399 296 aaKnown RBP7.7□□□□□ -1.18
HDAC6-234ENST00000493923 HS3ST3B1Q9Y662 390 aa7.7□□□□□ -1.18
HDAC6-234ENST00000493923 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 ZCWPW2A0A1B0GU75 182 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 A0A1B0GX78 115 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 OR2A25A4D2G3 310 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 FAM159BA6NKW6 160 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 VSTM2BA6NLU5 285 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 TRPC5OSA6NMA1 111 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 LOC110117498-PIK3R3F6TDL0 507 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 H0YGG7 62 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 H3BMM5 538 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 GPR37O15354 613 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 HDAC3O15379 428 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 CFLARO15519 480 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 SULT1B1O43704 296 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 DPM1O60762 260 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms