RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 PMP22Q01453 160 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 SRSF11Q05519 484 aaKnown RBP9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 ELOAQ14241 798 aaKnown RBP9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 LTB4RQ15722 352 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 PDCD2Q16342 344 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 SPRED3Q2MJR0 410 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 KRTAP21-3Q3LHN1 58 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 SLC25A25Q6KCM7 469 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 GALNT18Q6P9A2 607 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 FAM111BQ6SJ93 734 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 IL20RBQ6UXL0 311 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 HDXQ7Z353 690 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 GALNTL5Q7Z4T8 443 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 HOMEZQ8IX15 550 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 CCDC116Q8IYX3 515 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 LRRC25Q8N386 305 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 VWA5B2Q8N398 1253 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 BCORP1Q8N888 145 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 FAM98AQ8NCA5 519 aaKnown RBP9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 MDS2Q8NDY4 140 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 OR2T11Q8NH01 316 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 CLHC1Q8NHS4 586 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 GFM2Q969S9 779 aaKnown RBP9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 MARVELD3Q96A59 401 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 PPP1R36Q96LQ0 422 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 TSSK3Q96PN8 268 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 BBS4Q96RK4 519 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 ZNF395Q9H8N7 513 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 CXorf21Q9HAI6 301 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 OLAHQ9NV23 265 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 GIMAP2Q9UG22 337 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 CES1P1Q9UKY3 287 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 HIVEP1P15822 2718 aa9.65□□□□□ -0.86
TRAPPC12-222ENST00000493792 CNTRLQ7Z7A1 2325 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 HNRNPRO43390 633 aaKnown RBP9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 AKAP10O43572 662 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 NEURL1O76050 574 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 OR6B1O95007 311 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 LRATO95237 230 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 CRYABP02511 175 aaKnown RBP9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 SP1P08047 785 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 CT62P0C5K7 136 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 DHRS4L1P0CG22 281 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 DDCP20711 480 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 GRK2P25098 689 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 NTSP30990 170 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 GALNSP34059 522 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 EXOSC7Q15024 291 aaKnown RBP9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 INAQ16352 499 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 ATP6AP1LQ52LC2 224 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 AGBL2Q5U5Z8 902 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 SP5Q6BEB4 398 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 RPUSD3Q6P087 351 aaKnown RBP9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 OPN5Q6U736 354 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 Q6ZSR9 355 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 C9orf40Q8IXQ3 194 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 SAMD14Q8IZD0 417 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 ZNF781Q8N8C0 355 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 OR8K3Q8NH51 312 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 FAM76AQ8TAV0 307 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 SLC22A8Q8TCC7 542 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 FAR1Q8WVX9 515 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 ARL8AQ96BM9 186 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 TLCD1Q96CP7 247 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 TUBGCP3Q96CW5 907 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 CNRIP1Q96F85 164 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 PPP3R2Q96LZ3 170 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 RASL10BQ96S79 203 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 C1orf50Q9BV19 199 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 WWTR1Q9GZV5 400 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 MYNNQ9NPC7 610 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 TIMMDC1Q9NPL8 285 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 SLC35C2Q9NQQ7 365 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 SIRT5Q9NXA8 310 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 BAIAP2L1Q9UHR4 511 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 RAP2CQ9Y3L5 183 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 CCL27Q9Y4X3 112 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 CELSR1Q9NYQ6 3014 aa9.64□□□□□ -0.87
TRAPPC12-222ENST00000493792 C2orf92A0A1B0GVN3 265 aa9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 ANKUB1A6NFN9 424 aa9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 TMEM200CA6NKL6 621 aa9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 OR6C76A6NM76 312 aa9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 LSM1O15116 133 aaKnown RBP9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 NME2P1O60361 137 aa9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 IGKV3-11P04433 115 aa9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 ATP1B1P05026 303 aa9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 JUNP05412 331 aaKnown RBP9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 PCSK2P16519 638 aa9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 SDC1P18827 310 aa9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 NME2P22392 152 aa9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 TACR1P25103 407 aa9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 MAPK1P28482 360 aa9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 MPIP34949 423 aa9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 TRHRP34981 398 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 NR0B1P51843 470 aaKnown RBP9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 NCBP2P52298 156 aaKnown RBP eCLIP9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 SLC37A1P57057 533 aa9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 WDR4P57081 412 aaKnown RBP9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 GPR85P60893 370 aa9.63□□□□□ -0.87
TRAPPC12-222ENST00000493792 DUSP2Q05923 314 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms