RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 WDR55Q9H6Y2 383 aaPredicted RBP12.96□□□□□ -0.33
CCM2-217ENST00000492883 SLCO1B3Q9NPD5 702 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 MAP10Q9P2G4 905 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 CFL2Q9Y281 166 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 GOLGA8QA0A0J9YX86 632 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 GOLGA8OA6NCC3 632 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 GOLGA8NF8WBI6 632 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 SDHDO14521 159 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 SCAMP2O15127 329 aaKnown RBP12.95□□□□□ -0.34
CCM2-217ENST00000492883 PDPK1O15530 556 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 TBX19O60806 448 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 PRAMEF2O60811 474 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 CLPSP04118 112 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 PCSK2P16519 638 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 S1PR1P21453 382 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 EPHA3P29320 983 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 TRHRP34981 398 aaPredicted RBP12.95□□□□□ -0.34
CCM2-217ENST00000492883 DIO3P55073 304 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 MLLT10P55197 1068 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 MRPS35P82673 323 aaKnown RBP12.95□□□□□ -0.34
CCM2-217ENST00000492883 MPEG1Q2M385 716 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 ZNF628Q5EBL2 1059 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 PIGGQ5H8A4 983 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 CPTPQ5TA50 214 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 ZNF468Q5VIY5 522 aaPredicted RBP12.95□□□□□ -0.34
CCM2-217ENST00000492883 LRRC34Q8IZ02 419 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 KRTCAP2Q8N6L1 136 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 ZNF615Q8N8J6 731 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 Q8NA96 180 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 OR52R1Q8NGF1 315 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 SLC22A8Q8TCC7 542 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 ZNF675Q8TD23 568 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 TMEM125Q96AQ2 219 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 CIDECQ96AQ7 238 aaPredicted RBP12.95□□□□□ -0.34
CCM2-217ENST00000492883 CTHRC1Q96CG8 243 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 C5orf34Q96MH7 638 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 SIGLEC12Q96PQ1 595 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 RASL10BQ96S79 203 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 WWTR1Q9GZV5 400 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 EPN3Q9H201 632 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 GLIPR2Q9H4G4 154 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 ASIC5Q9NY37 505 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 PRODH2Q9UF12 536 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 ATP6V1HQ9UI12 483 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 ZNF639Q9UID6 485 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 ERVK-11Q9UQG0 969 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 USH1CQ9Y6N9 552 aa12.95□□□□□ -0.34
CCM2-217ENST00000492883 A8MVJ9 347 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 DIAPH2O60879 1101 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 BCAS2O75934 225 aaPredicted RBP12.94□□□□□ -0.34
CCM2-217ENST00000492883 SORBS2O94875 1100 aaKnown RBP12.94□□□□□ -0.34
CCM2-217ENST00000492883 GPC1P35052 558 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 NR0B1P51843 470 aaKnown RBP12.94□□□□□ -0.34
CCM2-217ENST00000492883 MANFP55145 182 aaKnown RBP12.94□□□□□ -0.34
CCM2-217ENST00000492883 CLDN8P56748 225 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 PDE7AQ13946 482 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 EBPQ15125 230 aaKnown RBP12.94□□□□□ -0.34
CCM2-217ENST00000492883 MAPKAPK3Q16644 382 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 ZNF385BQ569K4 471 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 ZNF766Q5HY98 468 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 OPN5Q6U736 354 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 IL20RBQ6UXL0 311 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 FAM47EQ6ZV65 393 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 SPATA19Q7Z5L4 167 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 GPALPP1Q8IXQ4 340 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 TAGAPQ8N103 731 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 CISD2Q8N5K1 135 aaKnown RBP12.94□□□□□ -0.34
CCM2-217ENST00000492883 OR7A2PQ8NGA2 310 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 C16orf52Q8NHV5 167 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 ZFP28Q8NHY6 868 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 ERP27Q96DN0 273 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 ZBED6CLQ96FA7 236 aaPredicted RBP12.94□□□□□ -0.34
CCM2-217ENST00000492883 ZNF764Q96H86 408 aaPredicted RBP12.94□□□□□ -0.34
CCM2-217ENST00000492883 MAGED4Q96JG8 741 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 AMDHD1Q96NU7 426 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 DPY30Q9C005 99 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 KLHL1Q9NR64 748 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 ATAD3AQ9NVI7 634 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 HPF1Q9NWY4 346 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 MAPRE3Q9UPY8 281 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 PCDHGA10Q9Y5H3 936 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 COPG1Q9Y678 874 aaKnown RBP12.94□□□□□ -0.34
CCM2-217ENST00000492883 MGAQ8IWI9 3026 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 LOC400499M0QZD8 3231 aa12.94□□□□□ -0.34
CCM2-217ENST00000492883 PLOD3O60568 738 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 NEURL1O76050 574 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 SLITRK5O94991 958 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 OR6B1O95007 311 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 CBX7O95931 251 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 SP1P08047 785 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 LAMP1P11279 417 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 SOX3P41225 446 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 TLE1Q04724 770 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 HSPB3Q12988 150 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 RPS6KA2Q15349 733 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 INPP5JQ15735 1006 aaPredicted RBP12.93□□□□□ -0.34
CCM2-217ENST00000492883 PGS1Q32NB8 556 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 SLC9B1Q4ZJI4 515 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 SLC25A25Q6KCM7 469 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 OGFOD2Q6N063 350 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms