RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 C10orf91Q5T1B1 145 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 TMIGD1Q6UXZ0 262 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 FAM196AQ6ZSG2 479 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 TMUB2Q71RG4 321 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 GPSM1Q86YR5 675 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 SVBPQ8N300 66 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 RPLP0P6Q8NHW5 317 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 C1GALT1C1Q96EU7 318 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 TPD52L3Q96J77 140 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 ZNF668Q96K58 619 aaPredicted RBP9.21□□□□□ -0.94
VPS8-225ENST00000492449 TMEM68Q96MH6 324 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 ATXN3LQ9H3M9 355 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 LRTM1Q9HBL6 345 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 UFSP2Q9NUQ7 469 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 FNDC3AQ9Y2H6 1198 aaKnown RBP9.21□□□□□ -0.94
VPS8-225ENST00000492449 RAI2Q9Y5P3 530 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 SPIN1Q9Y657 262 aaPredicted RBP9.21□□□□□ -0.94
VPS8-225ENST00000492449 NBNO60934 754 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 ITGA10O75578 1167 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 POP4O95707 220 aaKnown RBP9.21□□□□□ -0.94
VPS8-225ENST00000492449 MST1P26927 711 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 ADORA2BP29275 332 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 FNTBP49356 437 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 RPS14P62263 151 aaKnown RBP9.21□□□□□ -0.94
VPS8-225ENST00000492449 SELENOWP63302 87 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 MBTD1Q05BQ5 628 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 MTAPQ13126 283 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 SV2CQ496J9 727 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 ZNF660Q6AZW8 331 aaPredicted RBP9.21□□□□□ -0.94
VPS8-225ENST00000492449 PAQR6Q6TCH4 344 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 LYPD4Q6UWN0 246 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 OAFQ86UD1 273 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 SLITRK4Q8IW52 837 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 NELL1Q92832 810 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 TMEM203Q969S6 136 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 KCTD12Q96CX2 325 aaKnown RBP9.21□□□□□ -0.94
VPS8-225ENST00000492449 IMP4Q96G21 291 aaKnown RBP9.21□□□□□ -0.94
VPS8-225ENST00000492449 GJD4Q96KN9 370 aaPredicted RBP9.21□□□□□ -0.94
VPS8-225ENST00000492449 CRB3Q9BUF7 120 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 TSSK6Q9BXA6 273 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 CACNG6Q9BXT2 260 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 GSDMCQ9BYG8 508 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 SLC6A20Q9NP91 592 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 MRPS18AQ9NVS2 196 aaKnown RBP9.21□□□□□ -0.94
VPS8-225ENST00000492449 RPS6KB2Q9UBS0 482 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 OR12D3Q9UGF7 316 aa9.21□□□□□ -0.94
VPS8-225ENST00000492449 YARS2Q9Y2Z4 477 aaKnown RBP9.21□□□□□ -0.94
VPS8-225ENST00000492449 TRBV23-1A0A0A0MS06 115 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 NCF1BA6NI72 391 aaPredicted RBP9.2□□□□□ -0.94
VPS8-225ENST00000492449 TTLL8A6PVC2 850 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 GABRR3A8MPY1 467 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 AGAP14A8MT82 685 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 NCF1CA8MVU1 366 aaPredicted RBP9.2□□□□□ -0.94
VPS8-225ENST00000492449 PRAMEF2O60811 474 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 C1SP09871 688 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 PAICSP22234 425 aaKnown RBP9.2□□□□□ -0.94
VPS8-225ENST00000492449 PCGF2P35227 344 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 PTGFRP43088 359 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 PGDP52209 483 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 CTSCP53634 463 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 SEC61A1P61619 476 aaKnown RBP9.2□□□□□ -0.94
VPS8-225ENST00000492449 SPIBQ01892 262 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 SOX4Q06945 474 aaPredicted RBP9.2□□□□□ -0.94
VPS8-225ENST00000492449 GTF2H2Q13888 395 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 DUOXA1Q1HG43 343 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 TMEM255AQ5JRV8 349 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 GTF2H2CQ6P1K8 395 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 GSG1LQ6UXU4 331 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 GPR142Q7Z601 462 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 STK40Q8N2I9 435 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 ZNF527Q8NB42 609 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 GPR156Q8NFN8 814 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 DBF4BQ8NFT6 615 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 OR9Q2Q8NGE9 314 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 OR52I1Q8NGK6 324 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 OR14A16Q8NHC5 309 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 NDRG1Q92597 394 aaKnown RBP9.2□□□□□ -0.94
VPS8-225ENST00000492449 HBEGFQ99075 208 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 PCYT2Q99447 389 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 MRTO4Q9UKD2 239 aaKnown RBP9.2□□□□□ -0.94
VPS8-225ENST00000492449 LOC390937A0A1W2PQ73 354 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 SMIM30A4D0T7 59 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 CARNS1A5YM72 827 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 OR6C75A6NL08 312 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 TEX46H3BTG2 121 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 HPXP02790 462 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 HIST1H2ABP04908 130 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 PRPS2P11908 318 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 LAG3P18627 525 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 GIFP27352 417 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 ETV5P41161 510 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 ARFIP1P53367 373 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 CRHR2Q13324 411 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 ILKQ13418 452 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 MINDY4Q4G0A6 757 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 FAM74A1Q5RGS3 127 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 ATAT1Q5SQI0 421 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 ZNF770Q6IQ21 691 aaPredicted RBP9.2□□□□□ -0.94
VPS8-225ENST00000492449 HIST3H2AQ7L7L0 130 aa9.2□□□□□ -0.94
VPS8-225ENST00000492449 PLEKHH3Q7Z736 793 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms