RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 RAB7BQ96AH8 199 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 SLC6A18Q96N87 628 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 EXOSC4Q9NPD3 245 aaKnown RBP11.75□□□□□ -0.53
HMGN1-220ENST00000492280 SLC35C2Q9NQQ7 365 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 REV1Q9UBZ9 1251 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 TBC1D29Q9UFV1 150 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 GPR52Q9Y2T5 361 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 GPR55Q9Y2T6 319 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-220ENST00000492280 ZAR1LA6NP61 321 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 K7EQS6 105 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 TLR4O00206 839 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 DPM1O60762 260 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 RNGTTO60942 597 aaKnown RBP11.75□□□□□ -0.53
HMGN1-220ENST00000492280 H1F0P07305 194 aaKnown RBP11.75□□□□□ -0.53
HMGN1-220ENST00000492280 CXCR2P25025 360 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 DLX2Q07687 328 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-220ENST00000492280 PGBD2Q6P3X8 592 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 SHFQ7M4L6 423 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 SLC46A3Q7Z3Q1 461 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 UBE2Q1Q7Z7E8 422 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 FAM83FQ8NEG4 500 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-220ENST00000492280 PATE1Q8WXA2 126 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 MYDGFQ969H8 173 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 MS4A6EQ96DS6 147 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 SLC17A9Q9BYT1 436 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 PLA2G12AQ9BZM1 189 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 BTBD1Q9H0C5 482 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 A4GALTQ9NPC4 353 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 QPCTLQ9NXS2 382 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 TVP23BQ9NYZ1 205 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 OSGIN1Q9UJX0 560 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 TMCC3Q9ULS5 477 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 TBX1O43435 398 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 PKLRP30613 574 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 TRIM23P36406 574 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 KCNJ5P48544 419 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 BCAP31P51572 246 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 ARHGAP19Q14CB8 494 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 PODNL1Q6PEZ8 512 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 VRK2Q86Y07 508 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 OR2L3Q8NG85 312 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 HTRA1Q92743 480 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 MAPKAP1Q9BPZ7 522 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 EGLN3Q9H6Z9 239 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 DDX31Q9H8H2 851 aaKnown RBP11.74□□□□□ -0.53
HMGN1-220ENST00000492280 KCND3Q9UK17 655 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 A4GNTQ9UNA3 340 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 CARD8Q9Y2G2 431 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 IFT52Q9Y366 437 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 MAN2B1O00754 1011 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 UGT2B17O75795 530 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 ZNF12P17014 697 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 HIST1H1TP22492 207 aaPredicted RBP11.74□□□□□ -0.53
HMGN1-220ENST00000492280 ADPRHP54922 357 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 RPE65Q16518 533 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 CLEC12AQ5QGZ9 265 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 KIAA1161Q6NSJ0 714 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 DACH2Q96NX9 599 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 UCK2Q9BZX2 261 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 POLR2J3Q9H1A7 115 aaKnown RBP11.74□□□□□ -0.53
HMGN1-220ENST00000492280 NKX2-4Q9H2Z4 354 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 FKBP14Q9NWM8 211 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 CNIH4Q9P003 139 aa11.74□□□□□ -0.53
HMGN1-220ENST00000492280 CPSF4LA6NMK7 179 aaKnown RBP11.73□□□□□ -0.53
HMGN1-220ENST00000492280 MMP11P24347 488 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 RGS6P49758 472 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 XKP51811 444 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 SLC9A5Q14940 896 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 INAVAQ3KP66 663 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 ZNF761Q86XN6 746 aaPredicted RBP11.73□□□□□ -0.53
HMGN1-220ENST00000492280 SLC34A3Q8N130 599 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 CYP4Z2PQ8N1L4 340 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 DEPDC4Q8N2C3 294 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 OR10G6Q8NH81 332 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 TRMT61AQ96FX7 289 aaKnown RBP11.73□□□□□ -0.53
HMGN1-220ENST00000492280 ZNF354BQ96LW1 612 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 KCNS3Q9BQ31 491 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 MAN2C1Q9NTJ4 1040 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 SACM1LQ9NTJ5 587 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 GDE1Q9NZC3 331 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 P2RX2Q9UBL9 471 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 TLX2O43763 284 aaPredicted RBP11.73□□□□□ -0.53
HMGN1-220ENST00000492280 PRKYO43930 277 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 ADAM23O75077 832 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 CH25HO95992 272 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 ASGR2P07307 311 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 ATP5A1P25705 553 aaKnown RBP11.73□□□□□ -0.53
HMGN1-220ENST00000492280 CD40LGP29965 261 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 NTSP30990 170 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 KIR2DL1P43626 348 aaPredicted RBP11.73□□□□□ -0.53
HMGN1-220ENST00000492280 AVPR1BP47901 424 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 RXRGP48443 463 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 HMGA2P52926 109 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 UGT2B15P54855 530 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 BTN3A2P78410 334 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 CHRNEQ04844 493 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 SSX1Q16384 188 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 ABHD17CQ6PCB6 329 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 ENPP7Q6UWV6 458 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 ZER1Q7Z7L7 766 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms