RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 GDF1P27539 372 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 PIGAP37287 484 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 XKP51811 444 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 NR0B1P51843 470 aaKnown RBP8.05□□□□□ -1.12
NUP50-217ENST00000491860 MAPK12P53778 367 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 NAA20P61599 178 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 SLC7A5Q01650 507 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 SNTA1Q13424 505 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 LYPD8Q6UX82 237 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 NCCRP1Q6ZVX7 275 aaPredicted RBP8.05□□□□□ -1.12
NUP50-217ENST00000491860 HOMEZQ8IX15 550 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 METTL4Q8N3J2 472 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 MMGT1Q8N4V1 131 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 ZNF441Q8N8Z8 693 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 OR5M9Q8NGP3 310 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 NEIL3Q8TAT5 605 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 DIO2Q92813 273 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 ERP27Q96DN0 273 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 PHF21BQ96EK2 531 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 HSPBAP1Q96EW2 488 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 PAFAH2Q99487 392 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 C1QTNF3Q9BXJ4 246 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 OR10A5Q9H207 317 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 CDC42EP4Q9H3Q1 356 aaKnown RBP8.05□□□□□ -1.12
NUP50-217ENST00000491860 XPR1Q9UBH6 696 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 PRODH2Q9UF12 536 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 TRPS1Q9UHF7 1281 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 PCTPQ9UKL6 214 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 CNOT11Q9UKZ1 510 aaKnown RBP8.05□□□□□ -1.12
NUP50-217ENST00000491860 HRH3Q9Y5N1 445 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 NPFFR2Q9Y5X5 522 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 NKX2-6A6NCS4 301 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 H3BQF6 201 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 ZNHIT1O43257 154 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 ZNF354AO60765 605 aaPredicted RBP8.04□□□□□ -1.12
NUP50-217ENST00000491860 TRIM3O75382 744 aaPredicted RBP8.04□□□□□ -1.12
NUP50-217ENST00000491860 ZWINTO95229 277 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 GOSR1O95249 250 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 ACSL3O95573 720 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 KRT6AP02538 564 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 KRT6BP04259 564 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 ATP1B1P05026 303 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 HPNP05981 417 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 KLK1P06870 262 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 SNRPAP09012 282 aaKnown RBP8.04□□□□□ -1.12
NUP50-217ENST00000491860 RHOXF2BP0C7M4 288 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 CTAGE8P0CG41 777 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 CSNK2A2P19784 350 aaPredicted RBP8.04□□□□□ -1.12
NUP50-217ENST00000491860 NT5EP21589 574 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 TIMP3P35625 211 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 GMPRP36959 345 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 GSTM5P46439 218 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 KRT6CP48668 564 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 MASP1P48740 699 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 NEK2P51955 445 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 MAP4K2Q12851 820 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 TRAF3Q13114 568 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 MYBPHQ13203 477 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 RASA2Q15283 850 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 TRADDQ15628 312 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 NHSL2Q5HYW2 709 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 PRAMEF20Q5VT98 475 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 SLC48A1Q6P1K1 146 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 ADGRD1Q6QNK2 874 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 LACC1Q8IV20 430 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 SLC22A9Q8IVM8 553 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 CTAGE4Q8IX94 777 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 ULK2Q8IYT8 1036 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 VWA5B2Q8N398 1253 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 RNF175Q8N4F7 328 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 GBP7Q8N8V2 638 aaPredicted RBP8.04□□□□□ -1.12
NUP50-217ENST00000491860 OR4F6Q8NGB9 312 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 OR10G3Q8NGC4 313 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 OR52B6Q8NGF0 335 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 SPPL2AQ8TCT8 520 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 SELENOMQ8WWX9 145 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 TMEM41AQ96HV5 264 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 JSRP1Q96MG2 331 aaPredicted RBP8.04□□□□□ -1.12
NUP50-217ENST00000491860 ANGPTL4Q9BY76 406 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 TNFRSF10DQ9UBN6 386 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 VPS29Q9UBQ0 182 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 ZNF629Q9UEG4 869 aaPredicted RBP8.04□□□□□ -1.12
NUP50-217ENST00000491860 PCDHA9Q9Y5H5 950 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 FAM215AQ9Y5M1 114 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 LIPGQ9Y5X9 500 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 ZNF780BQ9Y6R6 833 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 NIPBLQ6KC79 2804 aaeCLIP8.04□□□□□ -1.12
NUP50-217ENST00000491860 DNHD1Q96M86 4753 aa8.04□□□□□ -1.12
NUP50-217ENST00000491860 ANKHD1Q8IWZ3 2542 aaKnown RBP8.03□□□□□ -1.12
NUP50-217ENST00000491860 EXPH5Q8NEV8 1989 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 C15orf38-AP3S2A0A0A6YYH1 394 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 A0A0G2JNJ9 132 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 EXOC1LA0A1B0GW35 172 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 LRRC14BA6NHZ5 514 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 LRRC3CA6NJW4 275 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 GLOD5A6NK44 160 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 HRKO00198 91 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 ABCB7O75027 752 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 EPPINO95925 133 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 ACTL6AO96019 429 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms