RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 ADAP2Q9NPF8 381 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 RNF103-CHMP3A0A140T963 221 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 C21orf140B9A014 251 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 TLX3O43711 291 aaPredicted RBP20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 CAPNS1P04632 268 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 CT62P0C5K7 136 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 DLSTP36957 453 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 FOLR3P41439 243 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 CCT3P49368 545 aaKnown RBP20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 MTPNP58546 118 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 MGAT2Q10469 447 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 ELAVL1Q15717 326 aaKnown RBP20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 SPDYE7PQ495Y7 208 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 RUNDC3AQ59EK9 446 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 RABL3Q5HYI8 236 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 FAM111BQ6SJ93 734 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 UNQ6494/PRO21346Q6UXR6 183 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 ASRGL1Q7L266 308 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 VWA5B2Q8N398 1253 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 DOK4Q8TEW6 326 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 NKD1Q969G9 470 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 NAF1Q96HR8 494 aaKnown RBP20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 MAGED4Q96JG8 741 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 IKZF5Q9H5V7 419 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 ANKRA2Q9H9E1 313 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 ZCCHC3Q9NUD5 404 aaKnown RBP20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 WDR70Q9NW82 654 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 DKK4Q9UBT3 224 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 TCFL5Q9UL49 500 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 DMXL2Q8TDJ6 3036 aa20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 C15orf38-AP3S2A0A0A6YYH1 394 aa20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 CLIC1O00299 241 aa20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 UPK1AO00322 258 aa20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 TERTO14746 1132 aaKnown RBP20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 RPS15P62841 145 aaKnown RBP20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 MAP4K2Q12851 820 aa20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 DNASE1L3Q13609 305 aa20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 TRMT12Q53H54 448 aaKnown RBP20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 TMEM205Q6UW68 189 aa20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 SZRD1Q7Z422 152 aa20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 ARPINQ7Z6K5 226 aa20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 ANKRD37Q7Z713 158 aa20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 OR2L13Q8N349 312 aa20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 KIF2BQ8N4N8 673 aa20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 OR8J3Q8NGG0 315 aa20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 SFXN5Q8TD22 340 aa20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 PTPMT1Q8WUK0 201 aaPredicted RBP20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 CPPED1Q9BRF8 314 aaPredicted RBP20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 MESP1Q9BRJ9 268 aa20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 GPR87Q9BY21 358 aa20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 DDX18Q9NVP1 670 aaKnown RBP20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 PTGFRNQ9P2B2 879 aa20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 FARSAQ9Y285 508 aaKnown RBP20.3■□□□□ 0.84
VCPKMT-204ENST00000491402 LOC101059948A0A1B0GTJ6 334 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 C17orf105B2RV13 164 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 PLOD3O60568 738 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 TNNI3P19429 210 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 CHI3L1P36222 383 aaPredicted RBP20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 SLC7A2P52569 658 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 RPS18P62269 152 aaKnown RBP20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 PRR5P85299 388 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 SELPLGQ14242 412 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 C6orf163Q5TEZ5 329 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 IL22RA1Q8N6P7 574 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 C3orf14Q9HBI5 128 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 GMEB1Q9Y692 573 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 A0A087WV62 115 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 A8MUA0 341 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 IFI6P09912 130 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 LIPCP11150 499 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 F8A1P23610 371 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 PGDP52209 483 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 OR4D2P58180 307 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 TP53BP2Q13625 1128 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 FHL5Q5TD97 284 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 SAXO2Q658L1 398 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 ANGPTL8Q6UXH0 198 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 SLC15A3Q8IY34 581 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 SIMC1Q8NDZ2 872 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 PNPT1Q8TCS8 783 aaKnown RBP20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 TMEM125Q96AQ2 219 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 MOAP1Q96BY2 351 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 NEURL3Q96EH8 262 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 SH3GL1Q99961 368 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 THUMPD3Q9BV44 507 aaKnown RBP20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 FAM117AQ9C073 453 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 EPS8L2Q9H6S3 715 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 NTMQ9P121 344 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 ABCD2Q9UBJ2 740 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 CLCA3PQ9Y6N3 262 aa20.29■□□□□ 0.84
VCPKMT-204ENST00000491402 EMC8O43402 210 aa20.28■□□□□ 0.84
VCPKMT-204ENST00000491402 DNAJC8O75937 253 aaPredicted RBP20.28■□□□□ 0.84
VCPKMT-204ENST00000491402 ZNF267Q14586 743 aaPredicted RBP20.28■□□□□ 0.84
VCPKMT-204ENST00000491402 SFT2D3Q587I9 215 aa20.28■□□□□ 0.84
VCPKMT-204ENST00000491402 BHLHB9Q6PI77 547 aa20.28■□□□□ 0.84
VCPKMT-204ENST00000491402 BNC2Q6ZN30 1099 aaPredicted RBP20.28■□□□□ 0.84
VCPKMT-204ENST00000491402 GPR155Q7Z3F1 870 aa20.28■□□□□ 0.84
VCPKMT-204ENST00000491402 OR56A1Q8NGH5 318 aa20.28■□□□□ 0.84
VCPKMT-204ENST00000491402 CDRT15Q96T59 188 aa20.28■□□□□ 0.84
VCPKMT-204ENST00000491402 CADM1Q9BY67 442 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms