RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 FAHD1Q6P587 224 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 PLD3Q8IV08 490 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 IFI44Q8TCB0 444 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 PITX2Q99697 317 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 DPH7Q9BTV6 452 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 SPATA9Q9BWV2 254 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 POMT2Q9UKY4 750 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 ERVK-11Q9UQG0 969 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 FEZF1A0PJY2 475 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 CAPN5O15484 640 aaPredicted RBP21.49■■□□□ 1.03
USF3-203ENST00000491165 C9P02748 559 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 DAB2P98082 770 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 FAM92BQ6ZTR7 304 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 NAXDQ8IW45 347 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 DYNC2LI1Q8TCX1 351 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 TPD52L3Q96J77 140 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 TPT1P8Q9HAU6 139 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 DPM1O60762 260 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 C1GALT1C1LP0DN25 315 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 LAMP1P11279 417 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 PPM1FP49593 454 aaPredicted RBP21.49■■□□□ 1.03
USF3-203ENST00000491165 CSNK1G2P78368 415 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 ACSM2AQ08AH3 577 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 NPRL3Q12980 569 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 ACSM2BQ68CK6 577 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 MINDY2Q8NBR6 621 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 BAHD1Q8TBE0 780 aaPredicted RBP21.49■■□□□ 1.03
USF3-203ENST00000491165 WDR20Q8TBZ3 569 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 PHF10Q8WUB8 498 aaKnown RBP21.49■■□□□ 1.03
USF3-203ENST00000491165 SLC22A18Q96BI1 424 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 WDR34Q96EX3 536 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 FCRL4Q96PJ5 515 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 MTERF1Q99551 399 aaKnown RBP21.49■■□□□ 1.03
USF3-203ENST00000491165 NUDT22Q9BRQ3 303 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 RASSF1Q9NS23 344 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 ATXN7L1Q9ULK2 861 aaPredicted RBP21.49■■□□□ 1.03
USF3-203ENST00000491165 ENTPD2Q9Y5L3 495 aa21.49■■□□□ 1.03
USF3-203ENST00000491165 PCNX2A6NKB5 2137 aa21.48■■□□□ 1.03
USF3-203ENST00000491165 MYO1DO94832 1006 aa21.48■■□□□ 1.03
USF3-203ENST00000491165 PNLIPP16233 465 aa21.48■■□□□ 1.03
USF3-203ENST00000491165 RPP38P78345 283 aaKnown RBP21.48■■□□□ 1.03
USF3-203ENST00000491165 DDX39BQ13838 428 aaKnown RBP21.48■■□□□ 1.03
USF3-203ENST00000491165 SLBPQ14493 270 aaKnown RBP eCLIP21.48■■□□□ 1.03
USF3-203ENST00000491165 ZIC1Q15915 447 aa21.48■■□□□ 1.03
USF3-203ENST00000491165 CCDC71Q8IV32 467 aaPredicted RBP21.48■■□□□ 1.03
USF3-203ENST00000491165 MFSD4AQ8N468 514 aa21.48■■□□□ 1.03
USF3-203ENST00000491165 OR4K1Q8NGD4 311 aa21.48■■□□□ 1.03
USF3-203ENST00000491165 OR6Q1Q8NGQ2 317 aa21.48■■□□□ 1.03
USF3-203ENST00000491165 TGM7Q96PF1 710 aa21.48■■□□□ 1.03
USF3-203ENST00000491165 EPYCQ99645 322 aa21.48■■□□□ 1.03
USF3-203ENST00000491165 MAP3K3Q99759 626 aa21.48■■□□□ 1.03
USF3-203ENST00000491165 DUSP26Q9BV47 211 aa21.48■■□□□ 1.03
USF3-203ENST00000491165 KLHL3Q9UH77 587 aa21.48■■□□□ 1.03
USF3-203ENST00000491165 ASPMQ8IZT6 3477 aa21.48■■□□□ 1.03
USF3-203ENST00000491165 SCAMP2O15127 329 aaKnown RBP21.47■■□□□ 1.03
USF3-203ENST00000491165 EFNA1P20827 205 aaPredicted RBP21.47■■□□□ 1.03
USF3-203ENST00000491165 TPP2P29144 1249 aaPredicted RBP21.47■■□□□ 1.03
USF3-203ENST00000491165 NCS1P62166 190 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 CCL7P80098 99 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 INAQ16352 499 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 ZNF425Q6IV72 752 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 AHCYL2Q96HN2 611 aaKnown RBP21.47■■□□□ 1.03
USF3-203ENST00000491165 SIRT5Q9NXA8 310 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 PAIP2BQ9ULR5 123 aaKnown RBP21.47■■□□□ 1.03
USF3-203ENST00000491165 CORO2BQ9UQ03 480 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 COL27A1Q8IZC6 1860 aaPredicted RBP21.47■■□□□ 1.03
USF3-203ENST00000491165 NUP214P35658 2090 aaPredicted RBP21.47■■□□□ 1.03
USF3-203ENST00000491165 TMEM247A6NEH6 219 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 LCMT2O60294 686 aaKnown RBP21.47■■□□□ 1.03
USF3-203ENST00000491165 LDOC1O95751 146 aaPredicted RBP21.47■■□□□ 1.03
USF3-203ENST00000491165 ST6GAL1P15907 406 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 PPIBP23284 216 aaKnown RBP21.47■■□□□ 1.03
USF3-203ENST00000491165 PAGE2BQ5JRK9 111 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 TMEM236Q5W0B7 351 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 FCRL6Q6DN72 434 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 GRHL2Q6ISB3 625 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 ADCK2Q7Z695 626 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 ANKRD53Q8N9V6 530 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 OR6C4Q8NGE1 309 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 ITPKCQ96DU7 683 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 METTL2AQ96IZ6 378 aaKnown RBP21.47■■□□□ 1.03
USF3-203ENST00000491165 EHD1Q9H4M9 534 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 EPS8L2Q9H6S3 715 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 ADPRHL2Q9NX46 363 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 PMF1-BGLAPU3KQ54 211 aa21.47■■□□□ 1.03
USF3-203ENST00000491165 OR2A25A4D2G3 310 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 HAT1O14929 419 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 SUV39H1O43463 412 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 WBP4O75554 376 aaKnown RBP21.46■■□□□ 1.03
USF3-203ENST00000491165 BMP4P12644 408 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 CMPK1P30085 196 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 CSNK2BP67870 215 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 GPLD1P80108 840 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 HIST2H2ACQ16777 129 aaPredicted RBP21.46■■□□□ 1.03
USF3-203ENST00000491165 IQCCQ4KMZ1 466 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 STPG1Q5TH74 334 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 ZNF574Q6ZN55 896 aaPredicted RBP21.46■■□□□ 1.03
USF3-203ENST00000491165 AHSA2Q719I0 299 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 NAT6Q93015 286 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 C7orf34Q96L11 122 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms