RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 VASH2Q86V25 355 aa17.38■□□□□ 0.37
MCF2L-230ENST00000491028 OR2L13Q8N349 312 aa17.38■□□□□ 0.37
MCF2L-230ENST00000491028 OR7G2Q8NG99 324 aa17.38■□□□□ 0.37
MCF2L-230ENST00000491028 OR56A1Q8NGH5 318 aa17.38■□□□□ 0.37
MCF2L-230ENST00000491028 ADAMTS17Q8TE56 1095 aa17.38■□□□□ 0.37
MCF2L-230ENST00000491028 KAT2AQ92830 837 aa17.38■□□□□ 0.37
MCF2L-230ENST00000491028 WDR77Q9BQA1 342 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-230ENST00000491028 TRIM4Q9C037 500 aa17.38■□□□□ 0.37
MCF2L-230ENST00000491028 ZCCHC3Q9NUD5 404 aaKnown RBP17.38■□□□□ 0.37
MCF2L-230ENST00000491028 DDX18Q9NVP1 670 aaKnown RBP17.38■□□□□ 0.37
MCF2L-230ENST00000491028 NDE1Q9NXR1 346 aa17.38■□□□□ 0.37
MCF2L-230ENST00000491028 NTMQ9P121 344 aa17.38■□□□□ 0.37
MCF2L-230ENST00000491028 PPIEQ9UNP9 301 aaKnown RBP17.38■□□□□ 0.37
MCF2L-230ENST00000491028 ERVK-11Q9UQG0 969 aa17.38■□□□□ 0.37
MCF2L-230ENST00000491028 SNX8Q9Y5X2 465 aa17.38■□□□□ 0.37
MCF2L-230ENST00000491028 WDFY3Q8IZQ1 3526 aa17.38■□□□□ 0.37
MCF2L-230ENST00000491028 SPTBN2O15020 2390 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 TRBV5-3A0A0A0MS03 114 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 RNF103-CHMP3A0A140T963 221 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 A8MUA0 341 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 COQ9O75208 318 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 COX6A1P12074 109 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 PTGER1P34995 402 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 SOX18P35713 384 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 CCT3P49368 545 aaKnown RBP17.37■□□□□ 0.37
MCF2L-230ENST00000491028 PGDP52209 483 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 MRPS35P82673 323 aaKnown RBP17.37■□□□□ 0.37
MCF2L-230ENST00000491028 ART3Q13508 389 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 ZNF267Q14586 743 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-230ENST00000491028 SPDYE7PQ495Y7 208 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 CRTC2Q53ET0 693 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-230ENST00000491028 KIRREL2Q6UWL6 708 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 MRGPREQ86SM8 312 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 OR7G1Q8NGA0 311 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 OR11G2Q8NGC1 345 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 SLC2A12Q8TD20 617 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 C8orf44Q96CB5 159 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 LRRC58Q96CX6 371 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 FAM120BQ96EK7 910 aaKnown RBP17.37■□□□□ 0.37
MCF2L-230ENST00000491028 CGREF1Q99674 301 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 SLC35A5Q9BS91 424 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 CNPPD1Q9BV87 410 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 TMEM121BQ9BXQ6 578 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-230ENST00000491028 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.37■□□□□ 0.37
MCF2L-230ENST00000491028 C19orf53Q9UNZ5 99 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-230ENST00000491028 ERVK-19Q9WJR5 959 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 PCDHB14Q9Y5E9 798 aa17.37■□□□□ 0.37
MCF2L-230ENST00000491028 IGHV3-20A0A0C4DH32 117 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 FXYD1O00168 92 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 UPK1AO00322 258 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 PRAMEF2O60811 474 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 ATP5HO75947 161 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 UNC5CO95185 931 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 DDAH2O95865 285 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 CBX7O95931 251 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 GSNP06396 782 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 KRT16P08779 473 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 S1PR1P21453 382 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 PPIBP23284 216 aaKnown RBP17.36■□□□□ 0.37
MCF2L-230ENST00000491028 SLC26A5P58743 744 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 MXRA7P84157 204 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 EXT1Q16394 746 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 GTDC1Q4AE62 458 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 TRMT12Q53H54 448 aaKnown RBP17.36■□□□□ 0.37
MCF2L-230ENST00000491028 CCDC121Q6ZUS5 278 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 NFAM1Q8NET5 270 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-230ENST00000491028 NUP43Q8NFH3 380 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 B3GNT7Q8NFL0 401 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 ZFP90Q8TF47 636 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 SENP5Q96HI0 755 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-230ENST00000491028 MS4A4EQ96PG1 132 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 MESP1Q9BRJ9 268 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 IL1RL2Q9HB29 575 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 SLC6A13Q9NSD5 602 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 WDR70Q9NW82 654 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 SLC25A37Q9NYZ2 338 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 VAPAQ9P0L0 249 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 SLAMF8Q9P0V8 285 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 COPS7AQ9UBW8 275 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 GMEB1Q9Y692 573 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 CACNA1AO00555 2505 aa17.36■□□□□ 0.37
MCF2L-230ENST00000491028 AKAP13Q12802 2813 aa17.35■□□□□ 0.37
MCF2L-230ENST00000491028 C15orf38-AP3S2A0A0A6YYH1 394 aa17.35■□□□□ 0.37
MCF2L-230ENST00000491028 NSG1A0A0A6YYJ2 146 aa17.35■□□□□ 0.37
MCF2L-230ENST00000491028 ZNF891A8MT65 544 aaPredicted RBP17.35■□□□□ 0.37
MCF2L-230ENST00000491028 PEX12O00623 359 aa17.35■□□□□ 0.37
MCF2L-230ENST00000491028 KLK10O43240 276 aa17.35■□□□□ 0.37
MCF2L-230ENST00000491028 SEC24DO94855 1032 aaPredicted RBP17.35■□□□□ 0.37
MCF2L-230ENST00000491028 PSMG1O95456 288 aa17.35■□□□□ 0.37
MCF2L-230ENST00000491028 KRT75O95678 551 aa17.35■□□□□ 0.37
MCF2L-230ENST00000491028 HPP00738 406 aa17.35■□□□□ 0.37
MCF2L-230ENST00000491028 IGKV3-11P04433 115 aa17.35■□□□□ 0.37
MCF2L-230ENST00000491028 CHI3L1P36222 383 aaPredicted RBP17.35■□□□□ 0.37
MCF2L-230ENST00000491028 SAXO2Q658L1 398 aa17.35■□□□□ 0.37
MCF2L-230ENST00000491028 C8orf82Q6P1X6 216 aaPredicted RBP17.35■□□□□ 0.37
MCF2L-230ENST00000491028 NDUFAF7Q7L592 441 aa17.35■□□□□ 0.37
MCF2L-230ENST00000491028 SZRD1Q7Z422 152 aa17.35■□□□□ 0.37
MCF2L-230ENST00000491028 ARPINQ7Z6K5 226 aa17.35■□□□□ 0.37
MCF2L-230ENST00000491028 MSRB3Q8IXL7 192 aa17.35■□□□□ 0.37
MCF2L-230ENST00000491028 OR1N1Q8NGS0 311 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms