RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 UFD1Q92890 307 aa18.33■□□□□ 0.53
SNAPC3-206ENST00000490969 TMEM169Q96HH4 297 aa18.33■□□□□ 0.53
SNAPC3-206ENST00000490969 SENP5Q96HI0 755 aaPredicted RBP18.33■□□□□ 0.53
SNAPC3-206ENST00000490969 ZSCAN5AQ9BUG6 496 aa18.33■□□□□ 0.53
SNAPC3-206ENST00000490969 A0A0A6YYJ9 748 aa18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 CIB4A0PJX0 185 aa18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 FAAHO00519 579 aa18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 STC2O76061 302 aa18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 RAF1P04049 648 aa18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 LINC00271P0C7V0 271 aa18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 HK1P19367 917 aa18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 GABRA5P31644 462 aa18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 BTG1P62324 171 aa18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 LRRC32Q14392 662 aa18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 CCDC85BQ15834 202 aaPredicted RBP18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 ZNF284Q2VY69 593 aa18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 ADGRF1Q5T601 910 aa18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 PGBD2Q6P3X8 592 aa18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 SPRED2Q7Z698 418 aa18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.33■□□□□ 0.529e-6■□□□□ 8.6
SNAPC3-206ENST00000490969 POLDIP3Q9BY77 421 aaKnown RBP18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 MED28Q9H204 178 aa18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 ZSCAN32Q9NX65 697 aa18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 GULP1Q9UBP9 304 aa18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 BACE2Q9Y5Z0 518 aa18.33■□□□□ 0.52
SNAPC3-206ENST00000490969 SEMA7AO75326 666 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 ABLIM3O94929 683 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 APOL3O95236 402 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 TPOP07202 933 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 CTBP2P56545 445 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 TMEM65Q6PI78 240 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 ZNF461Q8TAF7 563 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 UCN3Q969E3 161 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 LRR1Q96L50 414 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 ZNF582Q96NG8 517 aaPredicted RBP18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 B3GNT4Q9C0J1 378 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 NT5DC2Q9H857 520 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 ZFP64Q9NPA5 681 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 PLXNB3Q9ULL4 1909 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 SMAD6O43541 496 aaKnown RBP18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 NCR1O76036 304 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 IRF1P10914 325 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 SOAT1P35610 550 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 BDKRB1P46663 353 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 TMEM107Q6UX40 140 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 LRRC17Q8N6Y2 441 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 WBP2Q969T9 261 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 MSANTD3Q96H12 275 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 SYNDIG1Q9H7V2 258 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 EVA1BQ9NVM1 165 aa18.32■□□□□ 0.52
SNAPC3-206ENST00000490969 TMEM129A0AVI4 362 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 TRIM77I1YAP6 450 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 GTPBP1O00178 669 aaKnown RBP18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 GPR37L1O60883 481 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 TSPAN9O75954 239 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 TP53P04637 393 aaPredicted RBP18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 SLC6A1P30531 599 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 SOX9P48436 509 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 PTPN5P54829 565 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 MC1RQ01726 317 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 UBE3AQ05086 875 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 ZNF763Q0D2J5 394 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 MPEG1Q2M385 716 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 TYW3Q6IPR3 259 aaKnown RBP18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 CD200R1LQ6Q8B3 271 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 USP45Q70EL2 814 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 OR7G3Q8NG95 312 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 CLP1Q92989 425 aaKnown RBP18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 PLD4Q96BZ4 506 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 RANBP3Q9H6Z4 567 aaPredicted RBP18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 HEXA-AS1Q9H8Q6 139 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 HELZP42694 1942 aaKnown RBP18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 NPIPB15A6NHN6 443 aaPredicted RBP18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 COCHO43405 550 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 AKAP8O43823 692 aaKnown RBP18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 SOD1P00441 154 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 GBAP04062 536 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 H1F0P07305 194 aaKnown RBP18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 GAS1P54826 345 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 RPS13P62277 151 aaKnown RBP18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 GPR176Q14439 515 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 ZNF267Q14586 743 aaPredicted RBP18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 POU4F3Q15319 338 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 RPS26P11Q5JNZ5 115 aaPredicted RBP18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 REEP3Q6NUK4 255 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 TCTN3Q6NUS6 607 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 COMMD7Q86VX2 200 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 ZFP41Q8N8Y5 198 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 BADQ92934 168 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 PPCDCQ96CD2 204 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 MED8Q96G25 268 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 ISYNA1Q9NPH2 558 aa18.31■□□□□ 0.52
SNAPC3-206ENST00000490969 TRDV1A0A1B0GX56 115 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 PIPSLA2A3N6 862 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 NRG2O14511 850 aaPredicted RBP18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 SRPRAP08240 638 aaKnown RBP18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 DSTNP60981 165 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 ADAM15Q13444 863 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 SNAPC1Q16533 368 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 SLC25A30Q5SVS4 291 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms