RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 RB1P06400 928 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 EPCAMP16422 314 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 AMD1P17707 334 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 RFX2P48378 723 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 RAP2BP61225 183 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 PGBD3Q8N328 593 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 RNASE11Q8TAA1 199 aaKnown RBP10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 P2RY13Q9BPV8 354 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 C1QTNF7Q9BXJ2 289 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 EXO5Q9H790 373 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 TCF7L1Q9HCS4 588 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 NDUFB11Q9NX14 153 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 ZNF226Q9NYT6 803 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 BTNL2Q9UIR0 455 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 RASD1Q9Y272 281 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 ADAMTSL3P82987 1691 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 A0A0A6YYJ9 748 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 ARPC1BO15143 372 aaKnown RBP10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 ALDH1A1P00352 501 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 MT-ND4P03905 459 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 NFYAP23511 347 aaPredicted RBP10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 PTPN6P29350 595 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 GRK5P34947 590 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 PGDP52209 483 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 ARFIP1P53367 373 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 MRPS6P82932 125 aaKnown RBP10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 SEMG2Q02383 582 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 TNK1Q13470 666 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 SLBPQ14493 270 aaKnown RBP eCLIP10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 TRAM1Q15629 374 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 DUSP28Q4G0W2 176 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 PRAMEF17Q5VTA0 474 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 PRPF38BQ5VTL8 546 aaKnown RBP10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 OTUD1Q5VV17 481 aaPredicted RBP10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 CYHR1Q6ZMK1 362 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 FRRS1Q6ZNA5 592 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 PLEKHH3Q7Z736 793 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 CELF5Q8N6W0 485 aaKnown RBP10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 RAD9AQ99638 391 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 TMEM175Q9BSA9 504 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 LYARQ9NX58 379 aaKnown RBP10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 F8W036 122 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 GABRPO00591 440 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 RLN2P04090 185 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 PIPP12273 146 aaPredicted RBP10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 RPL4P36578 427 aaKnown RBP10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 AFF1P51825 1210 aaKnown RBP10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 ZNF140P52738 457 aaPredicted RBP10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 BLOC1S1P78537 153 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 NFATC2Q13469 925 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 ZNF169Q14929 603 aaPredicted RBP10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 IL20RBQ6UXL0 311 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 TRIM46Q7Z4K8 759 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 NXPE1Q8N323 547 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 NANOGP1Q8N7R0 232 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 TMEM185AQ8NFB2 350 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 NLGN4YQ8NFZ3 816 aaPredicted RBP10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 OR4C6Q8NH72 309 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 SLC16A10Q8TF71 515 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 CHAC2Q8WUX2 184 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 C1QTNF3Q9BXJ4 246 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 MFFQ9GZY8 342 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 TLR9Q9NR96 1032 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 A0A1W2PPK0 400 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 F5H0A9 414 aaPredicted RBP10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 SDC3O75056 442 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 PEX14O75381 377 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 KRT33AO76009 404 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 CLDN7O95471 211 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 ZNF14P17017 642 aaPredicted RBP10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 CORO1AP31146 461 aaKnown RBP10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 HOXA11P31270 313 aaPredicted RBP10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 GBX1Q14549 363 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 TMIGD1Q6UXZ0 262 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 PAQR9Q6ZVX9 377 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 ZSCAN1Q8NBB4 408 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 THAP6Q8TBB0 222 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 SLC22A8Q8TCC7 542 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 GNPDA2Q8TDQ7 276 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 COL26A1Q96A83 441 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 EFCAB11Q9BUY7 163 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 OR51B5Q9H339 312 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 TRPV4Q9HBA0 871 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 HHATLQ9HCP6 504 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 PRELID3BQ9Y3B1 194 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 PCDHGA2Q9Y5H1 932 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 PRAMEF2O60811 474 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 GATBO75879 557 aaKnown RBP10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 HSD3B1P14060 373 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 HSD3B2P26439 372 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 RBMS1P29558 406 aaKnown RBP10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 AGTR1P30556 359 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 SSR2P43308 183 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 ST3GAL3Q11203 375 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 GPRC6AQ5T6X5 926 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 AGTRAPQ6RW13 159 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 MTSS1LQ765P7 747 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 C12orf45Q8N5I9 185 aaPredicted RBP10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 BHLHE41Q9C0J9 482 aaPredicted RBP10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 RDH14Q9HBH5 336 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms