RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 SF3B4Q15427 424 aaKnown RBP eCLIP9.58□□□□□ -0.88
TTC28-207ENST00000490475 GGTA1PQ4G0N0 100 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 CFAP157Q5JU67 520 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 TBCELQ5QJ74 424 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 WLSQ5T9L3 541 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 CES4AQ5XG92 561 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 SLC22A10Q63ZE4 541 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 SCIMPQ6UWF3 145 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 C3P1Q6ZMU1 363 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 FAM47EQ6ZV65 393 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 FGD2Q7Z6J4 655 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 YTHDF3Q7Z739 585 aaKnown RBP9.58□□□□□ -0.88
TTC28-207ENST00000490475 ZNF295-AS1Q8N0V1 137 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 ZCCHC7Q8N3Z6 543 aaKnown RBP9.58□□□□□ -0.88
TTC28-207ENST00000490475 OR52N2Q8NGI0 321 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 SELENOMQ8WWX9 145 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 LRRC46Q96FV0 321 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 KCNA7Q96RP8 456 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 CSF3RQ99062 836 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 HBEGFQ99075 208 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 SERPINI1Q99574 410 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 MECRQ9BV79 373 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 GATA5Q9BWX5 397 aaPredicted RBP9.58□□□□□ -0.88
TTC28-207ENST00000490475 ZNF717Q9BY31 904 aaPredicted RBP9.58□□□□□ -0.88
TTC28-207ENST00000490475 MRPL1Q9BYD6 325 aaKnown RBP9.58□□□□□ -0.88
TTC28-207ENST00000490475 TTTY12Q9BZ98 90 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 RPF2Q9H7B2 306 aaKnown RBP9.58□□□□□ -0.88
TTC28-207ENST00000490475 TNFRSF12AQ9NP84 129 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 MID1IP1Q9NPA3 183 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 LYARQ9NX58 379 aaKnown RBP9.58□□□□□ -0.88
TTC28-207ENST00000490475 MKS1Q9NXB0 559 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 QPCTLQ9NXS2 382 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 CNIH4Q9P003 139 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 B4GALT7Q9UBV7 327 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 KCNN3Q9UGI6 736 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 TRPS1Q9UHF7 1281 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 BOKQ9UMX3 212 aaPredicted RBP9.58□□□□□ -0.88
TTC28-207ENST00000490475 EDARQ9UNE0 448 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 SNX6Q9UNH7 406 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 C2CD3Q4AC94 2353 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 PDZD2O15018 2839 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 HCFC1P51610 2035 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 TMEM200CA6NKL6 621 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 OR6C76A6NM76 312 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 TGFBR3LH3BV60 316 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 AQP7O14520 342 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 TRIM13O60858 407 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 LDB3O75112 727 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 ULK1O75385 1050 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 GLSO94925 669 aaPredicted RBP9.57□□□□□ -0.88
TTC28-207ENST00000490475 ESRRBO95718 433 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 KLK1P06870 262 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 CHN1P15882 459 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 IGFBP2P18065 325 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 ACVR2AP27037 513 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 SERPINB3P29508 390 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 RFC3P40938 356 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 MAN2A2P49641 1150 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 TMED10P49755 219 aaKnown RBP9.57□□□□□ -0.88
TTC28-207ENST00000490475 PKNOX1P55347 436 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 RPP38P78345 283 aaKnown RBP9.57□□□□□ -0.88
TTC28-207ENST00000490475 MPP2Q14168 576 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 GXYLT1Q4G148 440 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 TNFAIP8L3Q5GJ75 292 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 PIGGQ5H8A4 983 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 LIPMQ5VYY2 423 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 B3GNT6Q6ZMB0 384 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 FRMD7Q6ZUT3 714 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 SLC29A4Q7RTT9 530 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 CROCCP2Q86T23 111 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 GPR180Q86V85 440 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 ST13P4Q8IZP2 240 aaPredicted RBP9.57□□□□□ -0.88
TTC28-207ENST00000490475 ZNF721Q8TF20 911 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 UCN3Q969E3 161 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 SENP5Q96HI0 755 aaPredicted RBP9.57□□□□□ -0.88
TTC28-207ENST00000490475 FBXL20Q96IG2 436 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 DEFB127Q9H1M4 99 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 LDAHQ9H6V9 325 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 DDX31Q9H8H2 851 aaKnown RBP9.57□□□□□ -0.88
TTC28-207ENST00000490475 DEPPQ9NTK1 212 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 ACAD8Q9UKU7 415 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 SLC12A4Q9UP95 1085 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 RNF6Q9Y252 685 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 ATG4BQ9Y4P1 393 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 ASB4Q9Y574 426 aa9.57□□□□□ -0.88
TTC28-207ENST00000490475 SPG11Q96JI7 2443 aa9.56□□□□□ -0.88
TTC28-207ENST00000490475 FBN2P35556 2912 aa9.56□□□□□ -0.88
TTC28-207ENST00000490475 EML6Q6ZMW3 1958 aa9.56□□□□□ -0.88
TTC28-207ENST00000490475 A0A1W2PR48 441 aa9.56□□□□□ -0.88
TTC28-207ENST00000490475 FAM166BA8MTA8 275 aa9.56□□□□□ -0.88
TTC28-207ENST00000490475 NPIPA2E9PIF3 369 aa9.56□□□□□ -0.88
TTC28-207ENST00000490475 NPIPA3F8WFD2 350 aa9.56□□□□□ -0.88
TTC28-207ENST00000490475 C19orf84I3L1E1 186 aa9.56□□□□□ -0.88
TTC28-207ENST00000490475 PROM1O43490 865 aa9.56□□□□□ -0.88
TTC28-207ENST00000490475 TMPRSS11DO60235 418 aa9.56□□□□□ -0.88
TTC28-207ENST00000490475 PRKNO60260 465 aaPredicted RBP9.56□□□□□ -0.88
TTC28-207ENST00000490475 PRKRAO75569 313 aaKnown RBP9.56□□□□□ -0.88
TTC28-207ENST00000490475 PDE9AO76083 593 aa9.56□□□□□ -0.88
TTC28-207ENST00000490475 KRT6AP02538 564 aa9.56□□□□□ -0.88
TTC28-207ENST00000490475 KRT6BP04259 564 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms