RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 HSD17B1P14061 328 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 ELK3P41970 407 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 DSCR10P59022 87 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 WASHC5Q12768 1159 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 CLPPQ16740 277 aaPredicted RBP3.09□□□□□ -1.91
CD46-216ENST00000490278 NHLRC3Q5JS37 347 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 TCHHL1Q5QJ38 904 aaPredicted RBP3.09□□□□□ -1.91
CD46-216ENST00000490278 RAB12Q6IQ22 244 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 ABRAXAS1Q6UWZ7 409 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 C1orf186Q6ZWK4 172 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 MOB2Q70IA6 237 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 TAF8Q7Z7C8 310 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 YRDCQ86U90 279 aaKnown RBP3.09□□□□□ -1.91
CD46-216ENST00000490278 CDC20BQ86Y33 519 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 LYG1Q8N1E2 194 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 ZNF491Q8N8L2 437 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 ARL10Q8N8L6 244 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 MLKLQ8NB16 471 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 FLVCR1-AS1Q8TAF5 88 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 ITLN1Q8WWA0 313 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 TMEM37Q8WXS4 190 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 TMEM45BQ96B21 275 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 NTNG2Q96CW9 530 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 RBM18Q96H35 190 aaKnown RBP3.09□□□□□ -1.91
CD46-216ENST00000490278 ACCSQ96QU6 501 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 COQ7Q99807 217 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 CBWD1Q9BRT8 395 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 SPXQ9BT56 116 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 FTHL17Q9BXU8 183 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 PNNQ9H307 717 aaKnown RBP3.09□□□□□ -1.91
CD46-216ENST00000490278 ZNF446Q9NWS9 450 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 EMCNQ9ULC0 261 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 CCPG1Q9ULG6 757 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 PTPRUQ92729 1446 aa3.09□□□□□ -1.92
CD46-216ENST00000490278 A0A0U1RRA0 63 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 TMEM89A2RUT3 159 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 TRIM49BA6NDI0 452 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 ARHGAP42A6NI28 874 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 K7ERI5 159 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 CYB561D2O14569 222 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 MCF2LO15068 1137 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 PHF1O43189 567 aaPredicted RBP3.08□□□□□ -1.92
CD46-216ENST00000490278 ALPPP05187 535 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 GSTA1P08263 222 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 CCDC192P0DO97 292 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 ALPPL2P10696 532 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 GNSP15586 552 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 MAT2AP31153 395 aaKnown RBP3.08□□□□□ -1.92
CD46-216ENST00000490278 SFNP31947 248 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 TRIM23P36406 574 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 MATKP42679 507 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 NPY2RP49146 381 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 SLC7A2P52569 658 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 STARD6P59095 220 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 NME3Q13232 169 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 BTG3Q14201 252 aaPredicted RBP3.08□□□□□ -1.92
CD46-216ENST00000490278 CCDC40Q4G0X9 1142 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 NEK5Q6P3R8 708 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 LUZP1Q86V48 1076 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 P2RY8Q86VZ1 359 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 ERC1Q8IUD2 1116 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 LRRC17Q8N6Y2 441 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.08□□□□□ -1.92
CD46-216ENST00000490278 U2AF1L4Q8WU68 220 aaKnown RBP3.08□□□□□ -1.92
CD46-216ENST00000490278 TMEM186Q96B77 213 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 C1orf147Q96MC9 270 aaPredicted RBP3.08□□□□□ -1.92
CD46-216ENST00000490278 NSMCE2Q96MF7 247 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 DEFB118Q96PH6 123 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 CPXM1Q96SM3 734 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 ST6GALNAC5Q9BVH7 336 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 XPO4Q9C0E2 1151 aaKnown RBP3.08□□□□□ -1.92
CD46-216ENST00000490278 SIRPDQ9H106 197 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 ABCC13Q9NSE7 274 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 ZNF581Q9P0T4 197 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 LHX3Q9UBR4 397 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 IKZF3Q9UKT9 509 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 SLC9A8Q9Y2E8 581 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 ZNF175Q9Y473 711 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 RPGRIP1LQ68CZ1 1315 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 RAD54L2Q9Y4B4 1467 aa3.08□□□□□ -1.92
CD46-216ENST00000490278 CFAP73A6NFT4 308 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 E2F3O00716 465 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 CFLARO15519 480 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 GPRIN2O60269 458 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 GOT2P00505 430 aaKnown RBP3.07□□□□□ -1.92
CD46-216ENST00000490278 OAS1P00973 400 aaKnown RBP3.07□□□□□ -1.92
CD46-216ENST00000490278 PROS1P07225 676 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 FAM200BP0CF97 657 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 BCL3P20749 454 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 ACP1P24666 158 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 UCP1P25874 307 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 TMOD1P28289 359 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 BRCC3P46736 316 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 RPL34P49207 117 aaKnown RBP3.07□□□□□ -1.92
CD46-216ENST00000490278 NUMBP49757 651 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 TRA2BP62995 288 aaKnown RBP3.07□□□□□ -1.92
CD46-216ENST00000490278 PDK1Q15118 436 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 CDC37Q16543 378 aaPredicted RBP3.07□□□□□ -1.92
CD46-216ENST00000490278 C17orf58Q2M2W7 97 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 C15orf32Q32M92 178 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms