RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 IL3P08700 152 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 CPA3P15088 417 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 DUSP8Q13202 625 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 SPIN4Q56A73 249 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 SLC22A10Q63ZE4 541 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 RGS9BPQ6ZS82 235 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 SLC22A16Q86VW1 577 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 TMEM251Q8N6I4 163 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 FAM13CQ8NE31 585 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 FAM57AQ8TBR7 257 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 RDH11Q8TC12 318 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 ADIPOR1Q96A54 375 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 CNRIP1Q96F85 164 aaPredicted RBP23.02■■□□□ 1.28
HMGN1-217ENST00000489072 ZNF681Q96N22 645 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 IL1RL2Q9HB29 575 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 PROK2Q9HC23 129 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 MAT2BQ9NZL9 334 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 DTX4Q9Y2E6 619 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 DLGAP4Q9Y2H0 992 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 HRH3Q9Y5N1 445 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 TLDC2A0PJX2 215 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 CCDC151A5D8V7 595 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 PRSS44E7EML9 344 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 FREM3P0C091 2139 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 CSNK2A2P19784 350 aaPredicted RBP23.01■■□□□ 1.27
HMGN1-217ENST00000489072 SERPINB3P29508 390 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 BTKQ06187 659 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 ACSM2AQ08AH3 577 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 MAP4K2Q12851 820 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 ART3Q13508 389 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 C6orf163Q5TEZ5 329 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 PRAMEF20Q5VT98 475 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 ACSM2BQ68CK6 577 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 CD163Q86VB7 1156 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 DND1Q8IYX4 353 aaKnown RBP23.01■■□□□ 1.27
HMGN1-217ENST00000489072 VWA5B2Q8N398 1253 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 FBXW8Q8N3Y1 598 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 CCDC63Q8NA47 563 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 SIMC1Q8NDZ2 872 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 ADCY4Q8NFM4 1077 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 OR7G1Q8NGA0 311 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 TP53INP1Q96A56 240 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 DMRTA2Q96SC8 542 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 BRINP2Q9C0B6 783 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 ZNF639Q9UID6 485 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 PSME2Q9UL46 239 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 LIPGQ9Y5X9 500 aa23.01■■□□□ 1.27
HMGN1-217ENST00000489072 GNG14A0A1W2PPG7 69 aa23■■□□□ 1.27
HMGN1-217ENST00000489072 LRATO95237 230 aa23■■□□□ 1.27
HMGN1-217ENST00000489072 TPOP07202 933 aa23■■□□□ 1.27
HMGN1-217ENST00000489072 NUDT17P0C025 328 aa23■■□□□ 1.27
HMGN1-217ENST00000489072 GRNP28799 593 aaKnown RBP23■■□□□ 1.27
HMGN1-217ENST00000489072 TIA1P31483 386 aaKnown RBP eCLIP23■■□□□ 1.272e-6■■□□□ 12.1
HMGN1-217ENST00000489072 MAGEA5P43359 124 aa23■■□□□ 1.27
HMGN1-217ENST00000489072 NAA20P61599 178 aa23■■□□□ 1.27
HMGN1-217ENST00000489072 EXOSC7Q15024 291 aaKnown RBP23■■□□□ 1.27
HMGN1-217ENST00000489072 CDSNQ15517 529 aa23■■□□□ 1.27
HMGN1-217ENST00000489072 LTB4RQ15722 352 aa23■■□□□ 1.27
HMGN1-217ENST00000489072 NTRK2Q16620 822 aa23■■□□□ 1.27
HMGN1-217ENST00000489072 HYAL4Q2M3T9 481 aa23■■□□□ 1.27
HMGN1-217ENST00000489072 CFAP157Q5JU67 520 aa23■■□□□ 1.27
HMGN1-217ENST00000489072 ARHGAP11AQ6P4F7 1023 aa23■■□□□ 1.27
HMGN1-217ENST00000489072 GALNT18Q6P9A2 607 aa23■■□□□ 1.27
HMGN1-217ENST00000489072 TAGAPQ8N103 731 aa23■■□□□ 1.27
HMGN1-217ENST00000489072 OR5M3Q8NGP4 307 aa23■■□□□ 1.27
HMGN1-217ENST00000489072 AENQ8WTP8 325 aaKnown RBP23■■□□□ 1.27
HMGN1-217ENST00000489072 C16orf78Q8WTQ4 265 aa23■■□□□ 1.27
HMGN1-217ENST00000489072 EBPLQ9BY08 206 aa23■■□□□ 1.27
HMGN1-217ENST00000489072 UTS2RQ9UKP6 389 aa23■■□□□ 1.27
HMGN1-217ENST00000489072 CNOT11Q9UKZ1 510 aaKnown RBP23■■□□□ 1.27
HMGN1-217ENST00000489072 SEC23IPQ9Y6Y8 1000 aaKnown RBP23■■□□□ 1.27
HMGN1-217ENST00000489072 E9PLN8 166 aa22.99■■□□□ 1.27
HMGN1-217ENST00000489072 CELA3AP09093 270 aa22.99■■□□□ 1.27
HMGN1-217ENST00000489072 GPX3P22352 226 aa22.99■■□□□ 1.27
HMGN1-217ENST00000489072 HLA-DQA1Q5Y7H0 255 aa22.99■■□□□ 1.27
HMGN1-217ENST00000489072 LRRC25Q8N386 305 aaPredicted RBP22.99■■□□□ 1.27
HMGN1-217ENST00000489072 FAM109AQ8N4B1 249 aa22.99■■□□□ 1.27
HMGN1-217ENST00000489072 CTHRC1Q96CG8 243 aa22.99■■□□□ 1.27
HMGN1-217ENST00000489072 VKORC1Q9BQB6 163 aa22.99■■□□□ 1.27
HMGN1-217ENST00000489072 SHCBP1LQ9BZQ2 653 aa22.99■■□□□ 1.27
HMGN1-217ENST00000489072 RYDENQ9NUL5 291 aaKnown RBP22.99■■□□□ 1.27
HMGN1-217ENST00000489072 SIRT5Q9NXA8 310 aa22.99■■□□□ 1.27
HMGN1-217ENST00000489072 CNIH4Q9P003 139 aa22.99■■□□□ 1.27
HMGN1-217ENST00000489072 NPFFR2Q9Y5X5 522 aa22.99■■□□□ 1.27
HMGN1-217ENST00000489072 ZNF780BQ9Y6R6 833 aa22.99■■□□□ 1.27
HMGN1-217ENST00000489072 ABCA12Q86UK0 2595 aa22.99■■□□□ 1.27
HMGN1-217ENST00000489072 PKDREJQ9NTG1 2253 aa22.99■■□□□ 1.27
HMGN1-217ENST00000489072 LRBAP50851 2863 aa22.99■■□□□ 1.27
HMGN1-217ENST00000489072 CBX7O95931 251 aa22.98■■□□□ 1.27
HMGN1-217ENST00000489072 IGHG3P01860 377 aa22.98■■□□□ 1.27
HMGN1-217ENST00000489072 DRD2P14416 443 aa22.98■■□□□ 1.27
HMGN1-217ENST00000489072 FBXW4P57775 412 aa22.98■■□□□ 1.27
HMGN1-217ENST00000489072 PCLAFQ15004 111 aa22.98■■□□□ 1.27
HMGN1-217ENST00000489072 TRMT12Q53H54 448 aaKnown RBP22.98■■□□□ 1.27
HMGN1-217ENST00000489072 EMC4Q5J8M3 183 aa22.98■■□□□ 1.27
HMGN1-217ENST00000489072 LIPMQ5VYY2 423 aa22.98■■□□□ 1.27
HMGN1-217ENST00000489072 SP5Q6BEB4 398 aaPredicted RBP22.98■■□□□ 1.27
HMGN1-217ENST00000489072 XKRXQ6PP77 449 aa22.98■■□□□ 1.27
HMGN1-217ENST00000489072 TRABD2AQ86V40 505 aa22.98■■□□□ 1.27
HMGN1-217ENST00000489072 C10orf107Q8IVU9 208 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms