RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 CLCN2P51788 898 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 SLC26A5P58743 744 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 LRRC74AQ0VAA2 488 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 MAP4K2Q12851 820 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 CEBPEQ15744 281 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 ST3GAL2Q16842 350 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 FAM174BQ3ZCQ3 159 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 AGKQ53H12 422 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 SPANXN4Q5MJ08 99 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 GKAP1Q5VSY0 366 aaPredicted RBP9.6□□□□□ -0.87
SKA1-204ENST00000488454 PLAG1Q6DJT9 500 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 CAMKMTQ7Z624 323 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 ZNF295-AS1Q8N0V1 137 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 CPSF7Q8N684 471 aaKnown RBP9.6□□□□□ -0.87
SKA1-204ENST00000488454 B3GNT7Q8NFL0 401 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 ADCY4Q8NFM4 1077 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 OR8J2Q8NGG1 315 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 OR9A2Q8NGT5 310 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 APOBEC4Q8WW27 367 aaKnown RBP9.6□□□□□ -0.87
SKA1-204ENST00000488454 OR5P2Q8WZ92 322 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 CIDECQ96AQ7 238 aaPredicted RBP9.6□□□□□ -0.87
SKA1-204ENST00000488454 VMP1Q96GC9 406 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 TEX37Q96LM6 180 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 IMMP1LQ96LU5 166 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 AMDHD1Q96NU7 426 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 OR52E6Q96RD3 313 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 WDR77Q9BQA1 342 aaPredicted RBP9.6□□□□□ -0.87
SKA1-204ENST00000488454 MESP1Q9BRJ9 268 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 GLIPR2Q9H4G4 154 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 RMND5AQ9H871 391 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 CXorf21Q9HAI6 301 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 CCDC167Q9P0B6 97 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 ARL2BPQ9Y2Y0 163 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 FREM2Q5SZK8 3169 aa9.6□□□□□ -0.87
SKA1-204ENST00000488454 APC2O95996 2303 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 A0A1W2PS29 197 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 CCDC154A6NI56 674 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 A6NL46 340 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 RNASET2O00584 256 aaKnown RBP9.59□□□□□ -0.87
SKA1-204ENST00000488454 ZFAND5O76080 213 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 SERPINA7P05543 415 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 PGRP06401 933 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 MSX1P28360 303 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 IL12AP29459 219 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 ADSLP30566 484 aaPredicted RBP9.59□□□□□ -0.87
SKA1-204ENST00000488454 DGKQP52824 942 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 HSPB3Q12988 150 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 MLC1Q15049 377 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 PRSS53Q2L4Q9 553 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 SPRED3Q2MJR0 410 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 PRICKLE4Q2TBC4 344 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 ZNF385BQ569K4 471 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 CPZQ66K79 652 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 OR4F3Q6IEY1 312 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 JMJD6Q6NYC1 403 aaPredicted RBP9.59□□□□□ -0.87
SKA1-204ENST00000488454 BORAQ6PGQ7 559 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 FAM111BQ6SJ93 734 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 HSDL2Q6YN16 418 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 ZNF551Q7Z340 670 aaPredicted RBP9.59□□□□□ -0.87
SKA1-204ENST00000488454 GPR155Q7Z3F1 870 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 PIGWQ7Z7B1 504 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 APLFQ8IW19 511 aaPredicted RBP9.59□□□□□ -0.87
SKA1-204ENST00000488454 ANKS4BQ8N8V4 417 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 NFAM1Q8NET5 270 aaPredicted RBP9.59□□□□□ -0.87
SKA1-204ENST00000488454 OR7G1Q8NGA0 311 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 OR5L2Q8NGL0 311 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 OR4A15Q8NGL6 344 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 OR1N1Q8NGS0 311 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 SLC2A12Q8TD20 617 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 ZNF675Q8TD23 568 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 DOK4Q8TEW6 326 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 NUDT8Q8WV74 236 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 KAT2AQ92830 837 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 NCLNQ969V3 563 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 ERP27Q96DN0 273 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 FBXL20Q96IG2 436 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 THOC3Q96J01 351 aaKnown RBP9.59□□□□□ -0.87
SKA1-204ENST00000488454 MAGED4Q96JG8 741 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 DEFB126Q9BYW3 111 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 LHPPQ9H008 270 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 C3orf14Q9HBI5 128 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 MMP25Q9NPA2 562 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 FAM120CQ9NX05 1096 aaKnown RBP9.59□□□□□ -0.87
SKA1-204ENST00000488454 BCAP29Q9UHQ4 241 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 ERVK-19Q9WJR5 959 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 CFL2Q9Y281 166 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 SNX8Q9Y5X2 465 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 KCNMB2Q9Y691 235 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 ACACAQ13085 2346 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 FER1L5A0AVI2 2057 aa9.59□□□□□ -0.87
SKA1-204ENST00000488454 TRBV11-1A0A0K0K1C0 115 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 DYTNA2CJ06 578 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 A8MUI8 341 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 C9JVG2 144 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 NR5A2O00482 541 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 NDUFAB1O14561 156 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 CPSF4O95639 269 aaKnown RBP9.58□□□□□ -0.88
SKA1-204ENST00000488454 DDAH2O95865 285 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 C6orf47O95873 294 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 ITGB2P05107 769 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms