RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 LUMP51884 338 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 NDUFA8P51970 172 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 HUNKP57058 714 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 POLR2FP61218 127 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 CYCSP99999 105 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 SPAG1Q07617 926 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 CUL1Q13616 776 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 CYLC2Q14093 348 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 MTF1Q14872 753 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 TAB1Q15750 504 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 ZCWPW2Q504Y3 356 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 SMUG1Q53HV7 270 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 CCDC122Q5T0U0 273 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 CES4AQ5XG92 561 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 FAM173BQ6P4H8 233 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 DHRS4L2Q6PKH6 230 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 BLOC1S2Q6QNY1 142 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 MACC1Q6ZN28 852 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 NLRP9Q7RTR0 991 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 NANOGNBQ7Z5D8 188 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 CPEB2Q7Z5Q1 589 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 CNTN4Q8IWV2 1026 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 NELFCDQ8IXH7 590 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 ZBED8Q8IZ13 594 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 BBS5Q8N3I7 341 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 SPATA4Q8NEY3 305 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 FNDC8Q8TC99 324 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 ACMSDQ8TDX5 336 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 CTNNBL1Q8WYA6 563 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 SLCO2A1Q92959 643 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 HAUS1Q96CS2 278 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 C2orf48Q96LS8 159 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 XPO6Q96QU8 1125 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 SYT11Q9BT88 431 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 TMEM109Q9BVC6 243 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 FGFBP2Q9BYJ0 223 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 DDX47Q9H0S4 455 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 UPF3AQ9H1J1 476 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 DPH5Q9H2P9 285 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 DCLRE1BQ9H816 532 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 LZTFL1Q9NQ48 299 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 GPR173Q9NS66 373 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 IARS2Q9NSE4 1012 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 DCAF16Q9NXF7 216 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 TRPC4Q9UBN4 977 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 ZMAT5Q9UDW3 170 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 NOCTQ9UK39 431 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 SNX12Q9UMY4 172 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 KLK4Q9Y5K2 254 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 N6AMT1Q9Y5N5 214 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 ARID2Q68CP9 1835 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 KIAA0556O60303 1618 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 CAMSAP1Q5T5Y3 1602 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 DIP2AQ14689 1571 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 MED1Q15648 1581 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 MAGI1Q96QZ7 1491 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 NCAPD2Q15021 1401 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 CARMIL3Q8ND23 1372 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 PFASO15067 1338 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 ACEP12821 1306 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 A8MVM7 634 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 GOLGA8TH3BQL2 631 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 CETN3O15182 167 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 KMOO15229 486 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 NVLO15381 856 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 KERAO60938 352 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 GLCEO94923 617 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 LCA5LO95447 670 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 GNA14O95837 355 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 GUCA1CO95843 209 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 KRT14P02533 472 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 KRT16P08779 473 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 GOLGA8HP0CJ92 632 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 CD59P13987 128 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 GAP43P17677 238 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 DUTP33316 252 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 XIAPP98170 497 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 HSPA14Q0VDF9 509 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 MSLNQ13421 630 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 FCN2Q15485 313 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 IMMTQ16891 758 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 FASTKD1Q53R41 847 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 ZNF542PQ5EBM4 170 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 TNFAIP8L3Q5GJ75 292 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 ABRAXAS1Q6UWZ7 409 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 NHLRC1Q6VVB1 395 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 ZER1Q7Z7L7 766 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 LRRTM1Q86UE6 522 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 NUP37Q8NFH4 326 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 OR4D10Q8NGI6 311 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 NAT14Q8WUY8 206 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 DGCR14Q96DF8 476 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 NXPE2Q96DL1 559 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 CDKN2AIPNLQ96HQ2 116 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 NSMCE3Q96MG7 304 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 ZNF599Q96NL3 588 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 NEDD4LQ96PU5 975 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 CCT7Q99832 543 aa3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 ALKBH7Q9BT30 221 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-217ENST00000488087 IDI2Q9BXS1 227 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms