RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 SLC22A16Q86VW1 577 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 HDDC3Q8N4P3 179 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 LRRC17Q8N6Y2 441 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 C17orf47Q8NEP4 570 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 ANKRD20A12PQ8NF67 263 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 TMEM37Q8WXS4 190 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 XPO4Q9C0E2 1151 aaKnown RBP3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 ADNPQ9H2P0 1102 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 FAM124BQ9H5Z6 455 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 Q9HAA7 133 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 AMBNQ9NP70 447 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 ZNF490Q9ULM2 529 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 SPATA2Q9UM82 520 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 SLC6A5Q9Y345 797 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 TEX264Q9Y6I9 313 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 FGD5Q6ZNL6 1462 aa3.03□□□□□ -1.93
HMGB1P36-201ENST00000487709 TRBV5-4A0A0C4DH59 114 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 SRRM4A7MD48 611 aaKnown RBP3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 FOXI3A8MTJ6 420 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 SHISA9B4DS77 424 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 E9PAM4 449 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 K7EQG2 157 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 GALR3O60755 368 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 REC8O95072 547 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 SLC4A1P02730 911 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 ALPPP05187 535 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 ALPPL2P10696 532 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 MTIF2P46199 727 aaKnown RBP3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 ASMTP46597 345 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 CRMP1Q14194 572 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 GAMTQ14353 236 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 HKDC1Q2TB90 917 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 SNAI3Q3KNW1 292 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 UNC50Q53HI1 259 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 HERC4Q5GLZ8 1057 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 C9orf66Q5T8R8 295 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 RHBDD2Q6NTF9 364 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 CNSTQ6PJW8 725 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 APOOLQ6UXV4 268 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 BNIPLQ7Z465 357 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 ITIH5Q86UX2 942 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 GPBP1Q86WP2 473 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 WDR49Q8IV35 697 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 CHDHQ8NE62 594 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 OR4Q3Q8NH05 313 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 MRPL53Q96EL3 112 aaKnown RBP3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 RNF41Q9H4P4 317 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 TMEM231Q9H6L2 316 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 SLC7A10Q9NS82 523 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 TAS2R16Q9NYV7 291 aa3.02□□□□□ -1.93
HMGB1P36-201ENST00000487709 KIF7Q2M1P5 1343 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 KRT87PA6NCN2 255 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 RASGRF2O14827 1237 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 SEC22BO75396 215 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 GOT2P00505 430 aaKnown RBP3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 CXCL10P02778 98 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 GP9P14770 177 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 SELEP16581 610 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 MAPK3P27361 379 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 ETV5P41161 510 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 ELK3P41970 407 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 CCL11P51671 97 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 NLRP11P59045 1033 aaKnown RBP3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 RPS4XP62701 263 aaKnown RBP3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 MSLNQ13421 630 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 SNX1Q13596 522 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 ANKRD55Q3KP44 614 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 TCHHL1Q5QJ38 904 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 ZNF343Q6P1L6 599 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 NEK5Q6P3R8 708 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 MFSD7Q6UXD7 560 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 RBM43Q6ZSC3 357 aaKnown RBP3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 P4HA3Q7Z4N8 544 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 GOLGA7Q7Z5G4 137 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 TSEN54Q7Z6J9 526 aaKnown RBP3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 SLC39A11Q8N1S5 342 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 CENPSQ8N2Z9 138 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 CSNK1G2-AS1Q8NCQ2 148 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 PHYHIPQ92561 330 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 TMEM45BQ96B21 275 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 PINX1Q96BK5 328 aaKnown RBP3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 CPXM1Q96SM3 734 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 COQ7Q99807 217 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 CBWD1Q9BRT8 395 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 CXXC4Q9H2H0 198 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 RPAP3Q9H6T3 665 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 POLD4Q9HCU8 107 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 CUTCQ9NTM9 273 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 FETUBQ9UGM5 382 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 DNPEPQ9ULA0 475 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 RPH3AQ9Y2J0 694 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 ZNF175Q9Y473 711 aa3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 TDRD15B5MCY1 1934 aaKnown RBP3.01□□□□□ -1.93
HMGB1P36-201ENST00000487709 IGHV3-16A0A0C4DH30 117 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 A0A0J9YVX5 310 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 SH3PXD2BA1X283 911 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 TRABD2BA6NFA1 517 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 KRTAP16-1A8MUX0 517 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 K7ERI5 159 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 LRRTM2O43300 516 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms